Zonotrichia albicollis (white-throated sparrow): 102072172
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Entry
102072172 CDS
T07911
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102072172 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102072172 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zab04147
]
102072172 (VPS36)
Membrane trafficking [BR:
zab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102072172 (VPS36)
Exosome [BR:
zab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102072172 (VPS36)
Exosomal proteins of colorectal cancer cells
102072172 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
GRAM
BBL5_2nd
BBL5
V-ATPase_G_2
DUF5847
Xre-like-HTH
Sigma_reg_C
Motif
Other DBs
NCBI-GeneID:
102072172
NCBI-ProteinID:
XP_005482471
Ensembl:
ENSZALG00000003738
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVIQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYVKLSFKEHGQIEFYR
RLSEEITQRRWESLPTGQAMQVNKDSKAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIKFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtgatccag
cagcgcggcgtccgccttagcgacggagaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacacagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtatttattgaagagcaagcagctgggataggaaagagtgcc
aaaatagtagttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcctatgtcaagctttctttcaaagaacatggtcagattgagttctacaga
cgattatcagaagaaatcacacagaggagatgggagagcttgcccactggtcaggccatg
caagttaacaaggattcaaaggcaggaagaataagggctgtaggaattgttggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaagac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagccaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaagttcaagtcctac
ctactgagtatgggtatagctaatccagttacaagggaaacatatggatctggtacacag
taccacatgcaactggcaaagcaactggctggaatcctgcaggcacccctagaggagcga
ggggggatcatgtctctgacagaagtgtactgcctggtgaatcgtgctcgagggctggag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctggaatcactgaaattacca
ctaaggcttcggatatttgatagtggtgtcatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggatctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacaaagctaa
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