Zonotrichia albicollis (white-throated sparrow): 102072229
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Entry
102072229 CDS
T07911
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102072229 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102072229 (TAF4B)
03036 Chromosome and associated proteins [BR:
zab03036
]
102072229 (TAF4B)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102072229 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
102072229 (TAF4B)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102072229 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102072229
NCBI-ProteinID:
XP_005479722
Ensembl:
ENSZALG00000000052
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MSASAAPVRLMPGGRPEQAAACAPAAGSAPDRGGPAAAVPAGPAAAPPRPAGTPVLRGAA
PGVPRPVAPKGPPAATLQLPANLQLPPGTVLIRSSNGHLMLVSQQSIGQAENQTQSNTSV
RPSVPTSTPAIRICAVQNSGTQLVKKIAAAPVKTLSQTTNAVVSTVQTPAVIQPAAATAS
VTTVTAVKPLSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQTSASTEMLENVKKCKN
FLATLVKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYAELKSSPQPYLVPFLK
KSVLALRQLMPDPQSFIQQCMEQPAPTQEEVSTCPSAAPAPSTGAATSAVATTALPAVKP
SPAAVTAPVVVTPVLDSTSAAAPLQAVKAVPSPATGTVALGPAASVLTVASSGLTAVQPG
KSVLTSAVPASSLQAAKPVLVSTVASSAATPLQPLKPVMGTPIGIKISQPSSIVTRSAGA
PQVVKVKQLVVQQPSGAIVKQVSTLPQPSVLTLQTSAEKKMPLNTLVQSSQFPAGSILKQ
ITLPRNKILSLQASPVQKVKMKENGATSFRDEDDLNDVTSMAGVNLSEENASILAANSEL
IGTVIHSCADEPFLSLEALQSKILNIGKRHDIMELNSDVVNLISHATQERLRGLLEKLTV
IARHRVSTHKGSDKYIVCSDTRAQLRFLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDP
EQLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSLTIGSGLEGLKSNGIAG
SSGFSLTKQMLCPRVTRVCLRDLIFCMEQEREMKHSLRLYRALLK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcggcggcccccgtcaggctcatgcccggcgggcgcccggagcaggcggcc
gcctgcgccccagccgcgggctcggcgcccgaccggggcggccccgccgccgctgtgccc
gccgggcccgccgccgccccgccgcgtcccgcgggcaccccggtgctgcggggggccgct
cccggcgtcccgcggccggtggcgcccaaggggccgcccgcagccaccctccagttgccg
gccaacttgcagctgcccccaggaactgttcttatcagaagcagtaatggccacctaatg
ctggtatctcaacagtcaataggacaagcagagaaccagacacaaagcaacacaagtgtg
agaccatctgtgccaaccagcactcctgcaatcagaatatgtgctgtgcagaattctggc
acacagttagtaaagaaaatagcagctgctcctgtgaaaacgttatctcaaacaacaaat
gctgtggtttctactgttcagacacctgctgtaatacagccagcagctgcaacagctagt
gttactacagttactgctgtaaagcctttgagtactggaacacctgtaaaacttccagtt
acaggaccacctgcacaagctatctcccaaaaggcagtctctgtgaaagcagagggcaca
acagtagcacagaccagcgcttctacagagatgctagagaatgtgaagaaatgcaagaat
tttcttgctacgctagtaaaactggcgtctagcggacctcaagcccctgagatggggcag
aatgtgaagaatctggtgcaaaacctactggaagcaaaaattgaaccagaagaatttaca
aagaagttgtacgcagagcttaagtcatctccacaaccatatttagttcctttcctcaag
aaaagcgtgcttgccttacggcaactgatgcctgatcctcagagctttatccagcagtgt
atggagcagccagctccaacccaagaagaagtttccacttgtccctctgcagcaccagct
ccttccacaggagcggcaacctcggctgtagcaacaactgctcttccagctgtaaaaccc
tcacctgcagcagtcacagcccctgtagttgtcacaccagtccttgacagcacatcagca
gcagctcctctgcaggctgtgaaggctgttccttcccctgccacggggacagtggctctg
gggcccgcagcttccgtcctcaccgtggcatcgtcggggctgaccgctgtccagcctggc
aagtcagtcctcacctctgccgtgccagcgtcctctctgcaggctgcaaagccagtgctg
gtctctacagtggcatcttcagcagcaacccctctgcagcctctgaaaccagtcatggga
accccaattggcattaaaatctcgcagcccagctccatcgtgacgcggtcagctggtgct
ccgcaggtggttaaagtgaagcagctggtagtccagcaaccatcaggagccattgtcaag
caagtatccacgctcccacagccctcagtgctcaccctacagacatctgctgagaagaaa
atgccactgaatacacttgttcaaagcagccagtttcctgcaggttccattctgaagcaa
attaccttgccaagaaataaaattctgtcgcttcaagcatctcctgttcaaaaagtgaaa
atgaaagagaatggagcaacatccttcagagatgaagatgacctgaatgatgtgacttct
atggctggggttaatctcagtgaggagaatgccagcattttggcagcaaactctgagcta
attggcacggtgattcactcttgtgcagatgaaccatttctgtctctggaagctcttcag
agtaagatcttgaacataggtaaaaggcatgacattatggaacttaactctgatgttgtg
aacttgatctcccatgctacacaggaaagattacgagggctcctggaaaaactaactgta
attgctcggcacagagtatcaacccacaaggggagtgacaagtacatcgtatgtagtgac
accagagcacaactgagatttcttgagaagcttgatcacctagaaaagcagagaaaagat
gaagaggaacgtgaaatgttgcttcgagcagctaagagccgttccaataaagaagatcca
gagcaactgcggttaaagcagaaagcgaaagagatgcagcagctggaattagcacagatg
caacaaagagaagccaacctcacagctttggcagccattggaccaaggaagaaaagacca
ttggattcattgaccattggatctgggctcgagggtttgaaaagcaatggaattgctgga
tcatcaggttttagccttacgaagcagatgctctgtccacgagtaacccgtgtctgtctc
agggacttgatattctgcatggaacaagagagggagatgaagcattctctacgcttgtac
cgtgcccttctgaagtga
DBGET
integrated database retrieval system
