Zonotrichia albicollis (white-throated sparrow): 102072336
Help
Entry
102072336 CDS
T07911
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102072336 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102072336 (CNOT10)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102072336 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_17
TPR_7
TPR_MalT
EMP24_GP25L
BLOC1_2
DUF6058
DUF948
Motif
Other DBs
NCBI-GeneID:
102072336
NCBI-ProteinID:
XP_014130305
Ensembl:
ENSZALG00000002008
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFQAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTNNQLGGNTENTESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtactgaaaagcatgagggagcaggtacttct
gggattactgatcaggaaaaggagctgtcgagcagtgcattgcaagcttttcaggctgga
aactatgatgcttgtttacaacacctaaatacccttcaagacattaacaaagatgactac
aaaataactttgaatactgctgttgcagagttctgtaaaagtaatcagactaccacagac
aatttgagacaaacccttaaccagctgaaaaaccaggttcactctgttgttgaagaaatg
gatggtttggatgatgttgagaacagcatgctgtactacaatcaagctgtgatcctgtac
catctccgtcagtatactgaagctatatctgttggggagaagctgtaccagttcatagag
ccttttgaagagaagtttgcccaggctgtgtgcttcttgcttgtagacttatacctgtta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaaatgagtcaggtaataataccaataaagattcc
tcaaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcattaaaagcatgcaaaagggagatcaag
tctgttatgaatacagctgggaattcagctccttccctctttcttaagagcaattttgag
tatttgagaggcaattaccgtaaagctgtcaaacttttaaacagtgccaacattgccgaa
catccaggcttcatgaaaacaggtgaatgcttgaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaggccttg
caagaaaatgataatgcatgtgcacagctgggaacaggcagctcggatccaggtaaaaaa
ttttcagggagacccatgtgtacactactgactaacaaacgatacgagttgctctataac
tgtggcattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtctatcactcaaaccctcgtctgtggctgaggatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatcaatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtccata
cagaatgttgtttataatgatgggcagtcctcagcaatacctgtagccagcatggagttt
gcagcgatttgtctaagaaatgccttgctgctactgccagaagatcaacaggagcccaag
caggaaaatggatctaaaactaataatcagctggggggaaatacagaaaacactgaaagc
agtgaagcatgcagcaataaaagtcacgaaggggataaattcattgcagctcctccttct
tcacctttgaagaaacaggaactggagaatttaaggtgctcgatccttgcgtgtagtgct
tacgtggctctggctttgggggataaccttatggcattgaatcatgcagataaacttctg
cagcaaccaaagctctcagggtctcttaagtttcttgggcatttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccccgagaatgtcact
gatgtttcccttgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagacaccacagtgttaccccagttcggtcacgtct
gctcgaacaatgatgttgtttaacctcggaagtgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtcttcatcaggctgcttcgctgatccaccccaaagagatccctcca
gaggccatcctgctggctgtgtatcttgaattgcagaatggtaacacgcagctggcactg
cagatcatcaagaggaaccagctgctcccttctgtgaaaacactctctgacatgaggaaa
aagcctgttttccagccagtccactccatccagcctattcagatgccagctttcaccact
gttcaaaggaagtga
DBGET
integrated database retrieval system
