Zonotrichia albicollis (white-throated sparrow): 102072555
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Entry
102072555 CDS
T07911
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102072555 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102072555 (NUP88)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102072555 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
STX6_10_61_N
FliD_C
FlgN
AAA_23
FapA
Motif
Other DBs
NCBI-GeneID:
102072555
NCBI-ProteinID:
XP_014127378
Ensembl:
ENSZALG00000010551
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MVLELPKRWGKNSEFEGGKSTVNCSTIPIAERFFTSSTSLTLKHAAWYPCDTMEPHIVLL
TSDNTIRFYSLKVPHTPIKVIVLSDTEEETLTIKTGRAYTASLGETAVAFDFGPQVPVPK
HALGQRGSEEVLGYPLYILYENGETFLTYVSLLQSTGSPGKLLGPLPMHPAAEDNYGYDA
CAVLCLPCVPNILVIATESGMLYHCVVLDGEEDDEQSEKSWDPRSDLIPSLYVFECVELE
LALKLATGDEEDPLESDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSD
EEDKDSLQELGAEQKCFVEHILCTKPLPCRQPSPIRGFWIVSDVLGPTMICITNSYECIT
RPLLSTVHPASPPLLCTREDKELAVSPLRIVAEAEHSFEKHIQGILQRSSANPLHLKSAD
KDAAPPPEECLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEDLSYCREE
RKSLREMAERLADKYEEAKEKQEDIMNRMKKVLRSFHSQLPVLSDTEKDMKKELQTIHDQ
LQHLSNAIRQVKMKKEYQQKQMEKGCSPRKPSISLSAYQSKCIQAVLREEGEHIREMVKQ
INDIRSHVNF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagctgcccaaacgctggggcaagaattccgagtttgaaggtgggaaatcc
acggtgaactgcagcaccattcctattgcggagcgcttcttcaccagctcaacctccctg
accctaaagcatgcagcctggtacccctgtgacaccatggagccccacatcgtgctcctg
acatcagataacaccatcaggttttacagtctgaaggtgcctcacacacccatcaaggtg
attgtgctttcagacactgaggaggagactctgaccatcaaaacagggagagcgtacaca
gcatccctgggtgagacagccgtggccttcgacttcgggccgcaggtgccggtgcccaag
cacgccctgggccagcgcggcagcgaggaggtgctgggctaccccctgtacatcctctat
gagaatggagagaccttcctcacctacgtcagcctgctccagagcacgggcagcccgggg
aagctgctggggccgctgcccatgcacccggcggccgaggacaactacggctacgacgcc
tgcgccgtgctgtgcctgccctgcgtgcccaacatcctggtcattgccaccgagtcgggc
atgctctaccactgcgtggtgctggatggagaggaggatgatgagcagtcagagaagtcc
tgggacccaagatccgatcttattccttccctgtacgtgtttgaatgtgttgagctggaa
cttgcactgaaactggcaacaggagatgaggaagatcctttggagtctgatttctcttgc
ccaatcaagctgcaccgagatcccaaatgtccctctaggtaccactgcacacacgaagct
ggtgtccacagtgtgggcttgacatggatcaacaaactgcacaaattccttggttcagat
gaggaagacaaagacagtttacaggagctgggagcagaacagaagtgctttgttgaacat
attctttgtacaaaaccactgccatgcaggcagccttctccaattagaggattttggatt
gtttctgatgtcctggggcccaccatgatttgcatcaccaacagctatgagtgcattaca
aggcctctcttgagcactgtgcaccctgcgtcccctcccctgctgtgcaccagggaggac
aaggagctggccgtgtccccgctgcgcatcgtggccgaggctgagcattccttcgagaag
cacatccagggcatcctgcagcgcagctctgccaaccccctgcacctcaaatctgcagat
aaagatgctgctcctccccctgaagaatgccttcagctcctcagcagagccacccaggtg
ttcagagaggaatatatactgaaacaggacctggcaaaagaggagattcagcaaagagtg
aagctgctgtggggtcagaagaagaaacaactggaggatctgagttactgtcgagaggag
aggaaaagcttgcgggagatggccgagcgcttggctgacaagtatgaggaagccaaagag
aagcaagaagacatcatgaacaggatgaagaaagtccttcggagtttccactctcagctt
cctgttctatctgacactgaaaaagatatgaagaaggaactgcagacgatccatgaccag
ctgcagcacctgagcaatgctatcagacaggtgaaaatgaagaaggaataccaacagaaa
cagatggagaaggggtgcagcccccgcaagcccagcatcagcctcagtgcctaccagagc
aagtgcatccaggctgtcctgagagaggagggagaacacatcagggagatggtgaaacag
atcaacgacatcaggagccacgtgaacttctga
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integrated database retrieval system
