Zonotrichia albicollis (white-throated sparrow): 102072834
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Entry
102072834 CDS
T07911
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03430
Mismatch repair
zab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102072834 (PMS2)
03460 Fanconi anemia pathway
102072834 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102072834 (PMS2)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102072834 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF5741
Motif
Other DBs
NCBI-GeneID:
102072834
NCBI-ProteinID:
XP_005487414
Ensembl:
ENSZALG00000002927
UniProt:
A0A8D2M675
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MEAAEPCPQPAGAIRPIDRRSVHRICSGQVVLNLGTAVKELLENSLDAGATNIDIKLKDH
GAELIEVSDNGVGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVT
IFTCHKSAKVGTRLGFDHNGRITQRAPFPRQQGTTVSIQQLFYTLPVRHKEFQRNIKKEY
AKMVQLLQAYCIISKGVRINCTNQIGQGKKSCVISTAGSPSLKENIGAVFGQKQLQSLIP
FIQLPPSEAVCEEYGLNPADMPQNLYSIGGFISRCDHGVGRSTTDRQFFFINQRPCDPAK
VVKIVNEVYHVHNKHQYPFVVLNIGVDSECVDINVTPDKRQILLQEEKFLLAILKTSLME
MFGSDVNKLNVNQKLLDIAGNLKKTLPEEAERPQADILSDSETESPSGEGKRIMTLARLR
ESFSLHQATESNFQSSKKVKQQHSSPRQRLLDLTGGTVKIQKALLTKKAESCQKLDSGVS
VPRRHLGKLEDASDSGFCSISESDAGCSTPEAGSCINSESAVNSEEEFCSTEEQMQKECL
TTAGCSKKSLDCDVQVLGTEPELDQVNDWTDPNKLSQEANGCSPRVKRFKSRNFKSETDD
SKAGKYPEVKNTSVDVLVEVKKKIVPLEFSMKVLAEKVKKVIQQQQKNTETENYRRFKAK
ISPGDNKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEM
LQQHTVLQGQKLIVPQNLNLTAVNETILIENLEIFRKNGFDFVINENAPVTQRVKLVSLP
TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMRKLI
THMGEIEHPWNCPHGRPTMRHIVSLDLISPQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctgagccctgcccgcagcccgccggggccatccggcccatcgaccgccgg
tctgtgcatcgcatctgctcggggcaggtcgtgctgaacctcggcactgccgtgaaagag
ctgctggagaacagcctggatgccggagctaccaacatcgatataaaacttaaagatcat
ggggcagaactgatagaagtttcagataatggagttggagtggaagaggaaaactttgaa
ggcttgactctgaaacattacacatcaaagatacaagatttttctgatctaatacatgtt
gaaacatttgggtttcgaggtgaagctttgagttcactgtgtgcattaagtgatgtcacc
attttcacctgtcacaagtcagccaaggttgggacccgtttggggttcgatcacaatggc
agaatcacccagagggctcctttccctcggcagcagggcaccactgtcagcatccagcag
ttgttttacaccttgccagtgcggcacaaagagttccagagaaacatcaaaaaggaatat
gcaaaaatggtgcagctgttgcaggcctactgcattatttccaaaggagtgaggattaac
tgcactaatcaaattggccaggggaaaaaaagctgtgtgatatccactgctggaagtccc
agtttaaaggagaacattggagcagtatttggacaaaaacagttgcagagccttattcct
ttcattcagcttcctcctagtgaagctgtttgtgaagaatatggactcaaccctgctgac
atgccacaaaatctctatagcattggtggcttcatttcccgctgtgatcacggtgtggga
aggagcacgacagacagacagttcttcttcatcaaccaacggccctgtgatcctgccaag
gttgtcaagattgttaatgaagtttatcacgtacacaataaacaccagtatccatttgtt
gtccttaacattggggtagattctgagtgtgttgacatcaatgtaactcctgacaaaagg
cagattttacttcaggaggaaaagtttttattagcaattctaaagacttctctgatggag
atgtttggtagtgatgttaacaaactgaatgtcaatcagaaacttctggacattgcaggt
aacttgaagaagacacttcctgaagaggcagaaaggcctcaggcagacattctgtctgac
tctgagaccgagagtccaagtggtgaaggcaaaagaataatgactcttgccagattaagg
gagtcattctctctccatcaagcaacagaaagtaatttccaaagctctaaaaaggtaaag
cagcagcacagttcccctagacaaaggttacttgatctcactggggggactgtaaagatt
caaaaggctctcttgactaagaaggctgaaagttgtcagaagttggactcaggggtgtca
gttccaaggagacacttgggaaaattagaagatgcttcagattctggattctgcagtatt
tctgagtcagatgctggatgtagtacaccagaagctggaagctgcatcaacagtgaaagt
gcagttaattctgaggaagaattctgtagcacagaagaacagatgcagaaggaatgtctt
acaactgctgggtgcagtaagaaatcactggactgtgatgttcaggtcttgggcactgaa
cctgagctggatcaagtgaatgactggactgatccaaacaagctttctcaagaagcaaat
ggttgttccccaagagtaaaacgttttaaaagcagaaactttaaaagtgaaacagatgat
tccaaggcaggtaaatatcccgaagtgaagaacactagtgttgatgtactggtggaagtt
aaaaagaaaattgtgcctcttgaattctctatgaaggtcttggcagaaaaagtaaaaaag
gtaatacagcaacaacagaaaaatacagaaactgaaaattacagaagatttaaagcaaaa
attagtcctggggacaataaagtagcagaagatgaattaagaaaagagatcagtaaagaa
atgtttgcaaaaatggaaatcattggccagttcaatttagggtttattatagcaaagctg
aattctgatcttttcataattgaccagcatgctactgatgagaaatacaactttgagatg
ttgcaacagcacactgttctccaaggtcagaagctgatagtgcctcaaaatctcaattta
acagcagtaaatgaaactatattgattgaaaacctggaaatattcagaaaaaatggcttt
gattttgtcataaatgaaaatgctcctgtaactcaaagagttaaattggtatcattgcca
accagtaaaaactggacttttgggccacaagacatagatgagctgattttcatgttgagt
gactgccctggagtgatgtgcaggccctccagggtcaggcagatgtttgcttctcgagct
tgcaggaagtctgtgatgattggaactgcactgaatgtgcaggaaatgagaaaattgatc
acccacatgggtgagattgagcatccctggaactgcccccatggaaggcctaccatgaga
cacatagtcagtttggacttgatttcaccacaataa
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