Zonotrichia albicollis (white-throated sparrow): 102072991
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Entry
102072991 CDS
T07911
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04621
NOD-like receptor signaling pathway
zab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102072991 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102072991 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
zab04054
]
102072991 (NOD1)
Pattern recognition receptors [BR:
zab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102072991 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_16
FumaraseC_C
AAA_22
PIF1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
102072991
NCBI-ProteinID:
XP_005481045
Ensembl:
ENSZALG00000002544
UniProt:
A0A8D2M6E5
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MEGQLCANVDISVKKPPETSPLSFIALLKVHRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQPDKVRKILDLVQSKGEEVSEYFVYVLQKVTDAYYELQPWLDEIGYKPSENI
CSKPVVNTDPVSRYCQKLRHELGRDSKFFMLYAQKEEMLLEEIYSNSIMELVSFTNESLG
QVGQLEALFDDAVGLINEDGETVYVYGDAGIGKSILLQKIQSLWARKELDIGAKFFFCFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPAEVFHHILQFPHTVLFTFDGFDEIYSSFDL
SSVPEVCSPDEPIHPLALLVSLLRGKLLKGSKKILTARTGTEIQKNIIRKKVLLRGFSRN
NLKEYTAMFFKDEQQRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSSQWFDGHEL
PDSSVTLTDVFLLMIEVHLNRSVKTSLLKSNIRSQAEMFKSRKESLLALGKMAYKGMENS
SFIFEQEEVSSANISEEDLQLGFLRTVKGYSGCDSQATYEFLHLTLQSFFTALFLVMEEK
VGTKELLEFFSECSSMETAQPTCLRIPWLKKQLAGGDPFQNKEHFNFTNMFLCGLLSGPR
QKLFRHLVSPAVIKRKRKTLITYLGESMKSRLKGYTRSRLKSYNQVQVQPNFVWMLRCLY
ETQSEKVGRMAARRMHANYIKLAYCNACSADCSAISFLLHHFQKRLALDLDNNNINDYGI
KQLQPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLI
EECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGARAFADALRNHP
RLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVH
LWLIQNQITAKGVKCLSEALKENTTIQEICLNGNLISQEEAKAFENEERIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaatgtggacatttctgtgaaaaagcctccagaaacaagc
cctctgtccttcattgctttgctgaaggttcaccgagagcttctggtcagtaggatccga
aacacgcagtgcttgattgataacttgattaagaacgactacttctccactgaagatgca
gagattgttgtccagtttcctactcaaccagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaagtttcggaatatttcgtctatgtcctgcagaaagtcactgat
gcttactatgagcttcagccttggctggatgaaataggttacaagccttcagagaatatt
tgtagtaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagttttttatgctgtacgctcagaaggaggagatgcttctt
gaagaaatttactccaacagtattatggagctggtcagttttaccaatgagagtcttggc
caggtgggacaactagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactgtttatgtctacggtgatgcaggaattggaaaatccatcttgctgcaaaagata
caaagcctttgggccaggaaggagttggacataggggccaagtttttcttctgttttcgg
tgtaggatgtttagctgcttcaaggaagatgaagccatatgtttgaaagacctgctcttc
aaatataattgctacccagaccaggaccccgcagaagtgttccatcacatcttgcagttc
cctcatacagttcttttcacctttgatggctttgatgagatctattccagctttgatctc
agcagtgtacctgaggtatgctcacccgatgaacccatccaccccctggcactgctcgta
agccttctcagaggaaagcttcttaagggatccaagaaaattcttactgccaggacagga
actgagatccaaaaaaacatcattaggaagaaggtgttgctccgtggtttctccaggaat
aacctgaaggaatacacagctatgtttttcaaagatgagcagcaacgagcactggtgtca
aaccagttggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcacttccactccagccagtggtttgacggccacgagctc
ccagacagttctgttacattaacagatgtatttctgctcatgattgaagtacacctgaac
cgatcagtgaaaacaagtttgctgaagagcaatatcaggagccaagcagagatgttcaag
tcaagaaaggaaagtcttctagctttgggtaaaatggcatacaaagggatggagaactct
tcctttatctttgagcaggaggaagtctcatcggcaaacatctctgaagaagatttgcaa
ttgggctttctcaggacagttaaaggttatagtggctgtgacagtcaggccacttatgag
ttcttgcacttaacccttcagtcttttttcacagctttatttttggttatggaggagaag
gtgggtaccaaggagttacttgagtttttcagtgaatgttcttccatggagactgcccag
cctacttgccttcgtatcccctggctgaagaaacaactagcagggggggatcctttccaa
aataaagaacactttaattttaccaacatgtttctttgtggcctgctttctggacccagg
cagaagctcttcagacatttagtttcacctgcggtcattaagaggaagagaaaaacactc
atcacataccttggggagagcatgaaatcccgcctgaaaggctacactcggtccaggctg
aaaagctacaaccaggtgcaggtgcagcccaactttgtgtggatgctgaggtgcctgtat
gagacgcagagtgagaaggtggggaggatggcagcccgccgcatgcacgccaactacatc
aagctggcctactgcaacgcctgctctgccgactgcagcgccatttccttccttctgcac
cacttccaaaagcgcctggctctggatctggacaacaacaacatcaatgactatggaata
aagcagctgcaaccttgtttcagcaagcttgcagtcatcaggctgagtgtaaaccaggtc
acagatcatggcgtgaggatcttgtatgaagaactctccaagtaccaaattgtgtctttc
ttgggcttatacaacaaccaaatcactgatgttggagccaaatacgttgcaaaattaatt
gaagagtgttcaagcctggaatatgttaaaataggagcaaacaaaataacgagcgaagga
gggaagtgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtgg
ggtaatcaagttggagacgaaggagcaagggcatttgcagatgccctgaggaaccacccc
aggttaacaaatgtgagtcttgcattcaatggcatcacaacagagggaggcaagagtatt
gctgaagccatgcagcacaacaactccgtgaggatattctggttgactaaaaacgagctg
gatgatgaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcat
ttatggcttatccagaatcaaattacagccaaaggggtgaagtgcctcagtgaagctctc
aaggagaacacgactattcaagaaatctgcttgaatgggaacctgataagccaagaagag
gccaaagcttttgaaaatgaagagcggatcatttgcttttga
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integrated database retrieval system
