Zonotrichia albicollis (white-throated sparrow): 102073215
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Entry
102073215 CDS
T07911
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04510
Focal adhesion
zab04512
ECM-receptor interaction
zab04518
Integrin signaling
zab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102073215 (COL6A2)
04518 Integrin signaling
102073215 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102073215 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102073215 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zab04147
]
102073215 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
zab00536
]
102073215 (COL6A2)
Exosome [BR:
zab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102073215 (COL6A2)
Glycosaminoglycan binding proteins [BR:
zab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102073215 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
102073215 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
102073215
NCBI-ProteinID:
XP_005496088
Ensembl:
ENSZALG00000008649
UniProt:
A0A8D2QE71
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MFRQALLPTLLCVVLVPLHAAQLDVDAGDVSPTSCAEKRNCPINVYFIIDTSESVALQTV
PIQSLVDQIKRFIPMFIDKLESELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPR
LSAINYLGRGTFTDCAISNMTQQIQTQMANGVNFAVVITDGHVTGSPCGGMKMQAERARD
MGIKLFSVAPSEKVYEQGLREIANLPHELYRNNYAITQRDTLEIDVNTIDRIIQAMKHEA
YGECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGV
PGLKGEKGEIGSDGRRGAPGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGD
QGERGDAGIKGDPGRPGRSGPLGPPGEKGSQGLPGNPGAQGPAGAKGRKGEVGPPGPKGE
AGRRGDPGTKGSKGTPGGIGERGDPGPEGNRGLPGEVGNKGARGEQGLPGPRGPSGAVGE
PGRIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGEL
GPKGVQGTKGEKGEPGDPGPGGEPGQRGPPGEAGPEGTPGPPGDPGLTDCDVMTYVRETC
GCCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVINVVSRLGSIAKDPKSETGARVGV
VQYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRRKK
AQVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQR
VQKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELAVAQCTQRPVDVVFLLDGSE
RIGEQNFQSAHRFVEDVAQQLTLARSSSDPMNARIALLQYGSERDQNVVFPLTHNLTEIS
DALAQIKYLDSSSNIGSAIIHAINNIVLSPGNGQRLARRNAELSFVFITDGITGSKNLEE
AINSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtttagacaagccttgcttcccactctcctttgtgtggttctagttcctctccatgct
gctcagcttgatgtggatgctggagatgtcagtcctacctcctgtgcagaaaagaggaac
tgccccatcaatgtctacttcatcattgacacctcagagagcgtggctctgcagactgtg
cccatccagagccttgtggaccaaataaagcgcttcatccccatgttcatcgataaactg
gagagcgagctctaccagaatcaagtctacatcacgtggcagtttggtgggctccattac
tcagacgtggtagaaatttacagccctttgacaagcagcaaagacatttacctgcccagg
ctgtctgccattaattacctgggccggggcaccttcacagactgtgcaatctccaacatg
acccagcagatccagacccagatggccaacggtgtgaacttcgcggtggtcatcaccgat
ggccatgtgacgggcagcccctgtggggggatgaagatgcaggctgagagggcacgagac
atgggcatcaagctgttctcggtggcccccagcgagaaggtgtacgagcagggtctgcgg
gagatcgccaacctgccgcacgagctgtaccgcaacaactacgccatcacccagagggac
accctggagatcgatgtcaacaccatcgacaggatcatccaggctatgaaacacgaagcc
tacggcgagtgctacaagatgagctgcctggagattgcagggccacctggtcccaaggga
taccgaggacagaagggtgcaaaggggaacatgggtgagccaggttccccagggctgaag
ggacgacagggcgacccaggtattgaaggtccgatcggataccctggtcccaagggtgtc
ccagggctgaaaggagagaagggagaaattggatctgatggacggaggggtgcccctggc
ttggcaggaaggaatggcacagatggacagaagggcaggctggggagaattggaccacca
ggatgcaagggtgaccctggtgacaagggccctgatggctacccaggagatgcgggggac
caaggagaaagaggagatgcaggcataaagggggatcctggccggcctggtcgcagtgga
cccctggggcccccaggagaaaaaggaagccagggacttccaggcaaccctggagctcaa
gggcctgctggagccaagggaaggaaaggtgaagtgggacctcctggacccaaaggagag
gctgggcgacgtggagatccagggacgaaaggcagcaaaggcactcccggaggcatagga
gaaaggggagatcctggtccagagggtaatcgtggtctgcctggtgaggttggaaacaaa
ggagccaggggagaacaaggacttccgggacctcgaggcccttcaggtgctgtgggagag
ccagggaggataggatcacgtggggaccctggtgacttgggcccaagaggtgatgctgga
ccaccaggaccaaagggtgacagaggcaggcctggctttagctaccctggacccagagga
cctcagggtgacaagggtgagaaggggcagccaggacccaagggaggacgaggtgagctt
ggaccaaaaggagtacaagggaccaaaggagagaagggagagccgggtgatcctggccca
ggaggagagcctggacagcgtggtccacctggtgaagcaggccctgaggggacgcctggc
ccaccaggagatcctggtctgactgactgtgatgtgatgacctatgtgcgagagacatgc
ggatgctgtgactgtgagaagcgctgcggtgccctggacatcatgttcgtaatagacagc
tctgagagtatcggctacaccaacttcaccctggagaagaattttgtcatcaacgtggtc
agcaggctgggctctattgccaaggaccccaagtcagagacaggtgcccgtgttggggta
gtgcagtacagtcacgagggaacttttgaagccatcaagcttgatgatgagcgcattgat
tctctgtcgagcttcaaggaagcagttaagcgcctggagtggatcgctggaggcacctgg
acaccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggagaaagaaa
gcccaagtgtttgctgtggtgatcacagatgggcgctacgacccccgggatgacgacaag
aacctcggggctctttgtggcagagatgtggtggtcaacaccatcggcataggcgacatg
ttcgaccagccggagcagagtgagaccctggtctctattgcctgcaacgaaccccagcga
gtccagaagatgagactcttctcagacctagtggcagaggagttcattgacaagatggag
gatgtgctctgcccagatccacaggttgtctgccccgagctgccctgtcagacagagctt
gctgtagcccagtgcacccagcgccctgttgatgtcgtcttcttgctggacggctcagaa
aggatcggggagcagaacttccagagtgcccaccgcttcgtggaggatgtggcccagcag
ctgacgctggcccggagcagcagcgaccccatgaacgcccggatcgcgctgctgcaatac
ggcagtgagcgggaccagaacgtggtcttcccgctgacccacaacctcaccgagatctcc
gacgcgctggcacagatcaagtacctggactcgtcctccaacatcgggtcagccatcatc
cacgccatcaacaacatcgtgctcagcccaggcaacgggcagcgacttgcccggcgcaat
gccgagctctcctttgtcttcatcaccgatggcatcacgggaagcaagaacctggaggag
gccatcaactccatgaagaagcaagatgtcatgcccacagtggtggctcttgggagtgat
gtggacatggatgtcctgctaaagcttggccttggagaccgggcagccatcttccgggag
aaagactatgacagcctctcccagcccagcttcttcgacaggttcattcggtggatttgt
taa
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