Zonotrichia albicollis (white-throated sparrow): 102074159
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Entry
102074159 CDS
T07911
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102074159 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102074159 (TNPO1)
03009 Ribosome biogenesis [BR:
zab03009
]
102074159 (TNPO1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102074159 (TNPO1)
Ribosome biogenesis [BR:
zab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
102074159 (TNPO1)
Pre-60S particles
102074159 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
Cnd1
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
HEAT_GCN1_C_2
INTS7_N
Dopey_N
ARM_TBCD
UNC45-central
RTP1_C1
VPS15-like_hel
TPR_TTI1_C
HEAT_DAAF5
DUF3689
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
102074159
NCBI-ProteinID:
XP_014123449
Ensembl:
ENSZALG00000016213
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLLQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKEVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSKTVAQQHEEDGIEDDDDD
DDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPSGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgagtggaagcctgatgaacaggggcttctacagatcctgcagctgctcaag
gaatcgcaatctccggacaccaccacgcagagagccgttcaacaaaaactagaacaactt
aatcagtacccagatttcaacaactacctgatttttgttcttacaaagttgaagtctgaa
gatgagccaacacgttccttgagtggtcttatcttgaagaataatgtaaaagcacatttt
cacaactttccaaatggggtaactgacttcattaaaagcgaatgtttgaacaacattggt
gattcctcccccttaattagagctactgtaggcattctgataacaaccattgcctcaaaa
ggggagttacagaattggcctgaactcttgccaaagctttgcagcctgttggattctgaa
gattacaatacctgtgagggcgcttttggtgctcttcagaagatatgtgaagattctgct
gaaattttggatagtgatgtgttggaccggccactcaatatcatgatacctaagttcttg
cagttcttcaagcacagcagcccaaaaatacggtcccatgcagtggcatgtgtcaatcaa
tttatcatcagcagaactcaagctcttatgttgcacatagattcttttattgagaatctt
tttgcactggctggtgatgaggagcctgaagtacgcaaaaatgtttgccgtgctcttgta
atgttgctggaagttcgaatggatcgcctccttcctcatatgattagtatagttgagtac
atgcttcaaaggacccaggatcaagatgaaaatgtggctctggaggcatgtgaattttgg
ctgactttggctgaacagccaatttgtaaagaggtattatgtcggcatcttactaagctg
atacctgtgctggtaaatggtatgaaatattcagagattgatattattctgttgaagggg
gatgttgaagaagatgaagctattccagatagtgaacaggatataagacctcgtttccat
cgttcgaagacggtggctcagcaacacgaagaagatggtattgaagatgatgacgatgat
gatgatgagcttgatgatgatgatactatttctgactggaatttaaggaaatgttctgct
gctgctctagatgtcctagctaatgtatttcgtgatgaactcctaccacacatcttgcca
ctgttaaaggaattgctcttccaccccgagtgggtagttaaagaatccggtatccttgtt
cttggtgcaattgctgaaggctgcatgcagggtatgattccatatcttccagagctaatc
cctcaccttattcagtgcctctctgacaaaaaggctcttgtgcgctccattacatgctgg
actcttagtcgctatgcacactgggtagttagtcaacccccagacacatacttgaagcca
ttaatgactgagttgctaaagcgtatcttggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagagcttgttccttatcttgca
tatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgctcatt
ctttatgacgctataggaactctggcagattctgtaggacatcatctaaataaaccagaa
tatattcagatgctaatgcctccattaatccagaagtggaacatgctgaaggatgaagat
aaagatctcttccctttattagagtgcctgtcgtcagttgctactgccttgcaatctggc
tttcttccatactgtgaacctgtgtaccagcgctgtgtaaatctggtgcagaagacactt
gcacaagccatgttgcataatgctcaaccagaccaatatgaggctccagataaagatttc
atgattgtggctcttgatttactcagtggtttagctgaaggacttggaggcaacattgaa
cagctagtggctcgcagcaatatccttacattaatgtatcaatgcatgcaggacaaaatg
cccgaggtacggcagagttcttttgccttgttaggtgacctgacaaaggcatgttttcag
catgttaaaccttgcatcgctgatttcatgccaattttgggaaccaacctaaaccctgaa
ttcatttctgtgtgtaacaatgccacctgggcaatcggagaaatctctatccagatgggt
atagaaatgcagccttatattccaatggtcttgcaccagcttgtagaaataattaacaga
cccaacacaccaaagacgttgttagagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctgcgaaacataagagacaatgaggaaaaggattcagcattccgtgggatatgtaccatg
attacggtcaaccccagtggcgtagtccaagactttatttttttttgtgatgctgttgca
tcatggattagcccaaaagatgatcttcgagacatgttctgtaagattcttcatggattt
aaaaatcaagttggggatgagaattggaggcgtttctctgaccagtttcctcttccctta
aaagagcgccttgcagcttactatggagtttaa
DBGET
integrated database retrieval system
