Zonotrichia albicollis (white-throated sparrow): 102074414
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Entry
102074414 CDS
T07911
Symbol
SMG1
Name
(RefSeq) serine/threonine-protein kinase SMG1 isoform X2
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102074414 (SMG1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zab01001
]
102074414 (SMG1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102074414 (SMG1)
Enzymes [BR:
zab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102074414 (SMG1)
Protein kinases [BR:
zab01001
]
Serine/threonine kinases: Other
PIKK family [OT]
102074414 (SMG1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102074414 (SMG1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102074414 (SMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
RHD_RETREG1-3
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
102074414
NCBI-ProteinID:
XP_014122957
Ensembl:
ENSZALG00000016049
LinkDB
All DBs
Position
Unknown
AA seq
3215 aa
AA seq
DB search
MRKSQERPLSYSDESRLSNLLRRITREDDRDRRLATVKQLKEFIQQPENKLVLVKQLDNI
LTAIHDVLNESSKLLQELRQEGACCLGLLCASLSYEAEKIFKWIFSKFSSSTKDEVKLLY
LCATYKALETVGEKKAFSSLMQLVMTSLQSILENVDTPELLCKCVKCILLVSRCYPHIFS
TNFRDTVDILVGWHIDHTQKPSLTQQVSGWLQSLEPFWVADLTFSTTLLGQFLEDMEAYA
EDLSHVASGESVDEDIPPPSVSLPKLAALLRVFSTVVRSIGERFSPIRGPPITEAYVTDV
LYRVMRCVTAANQVFFSEAVLTAANECVGVLLGSLDPSMTIHCDMVITYGLDQMENCQTC
GTDYVISVLNLLTLIVEQINTKLPSSFVEKLFIPESKLLVLRYHKEKEVVAAALAVYQAV
LSLKNIPVLETAYRLILGEMTCALNSLLHSLHLPEACSEIQHDSFKKLISNVDNAKFVVI
FDLSALSTIGNAKNSLIGMWALSPTVFALLSKNLMIVHGDIAVHFPAVQYAVLYTLYSHC
SRHDHFISSSLSSSSPSLFDGAVISTVTTATKKHFSIILNLLGLLLKKDNLTQDTRKLLT
TWALEVALLMKKSETYAPLFSLPSFHNFCKGLLANTLLEDVNICLQACSSLHALSSSLPD
DLLQRCVDVCRVQLVHSGARVRQAFGKLLKSIRLDVVLSNRTHTEIQEISLAIRSHMSKA
PSNTFHPQDFSDVISFILYGNLHRTGKDNWLERLFYSCQRLDKRDQPTIPRNLLKTDAVL
WQWAVWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQDVSQWTTADNDEG
HSSNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFYTNRQTCQDWLTRIRL
SIMRVGLLAGQPAVTVRHGFDLLTEMKTNNSISQGNELEVTIMMLVEALCELHCPEAIQG
IAVWSSAVVGKSLSWINSVAQQAEGRFEKATAEYQEHLCSMTGVDCCITGFDKTVLKLAN
SNSVNNASPKHSLNGETRKTVLTKPSESSPEVINYLGNKACECYISIADWSAVQEWQNMV
HELKKSNSNTSINLKADFNYIKSLSSFESGQLTECTEQLELLPGENINLLAGGSKEKIDM
KKLLPNMLSPDPRELQKAVEVQLLRSSVCLATAVNHIEQEQKWQSISENLIKYLKQTSRI
AIGPLRLSTLTVSQSLPVLSTLQLYCSSALENTVCNRLTSEDCLIPLFNEALRSCKQHDV
RPWMHALRYTAYQNQLMEKLKEPTVPIKSHLMELGLTAAKFARKRGNIALATRLLAQCSE
VQLGKTTTAQDLVQHFKKLSAPGQIDEKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAIS
FCKSAKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRAQQQQNHSGLTTLSKNIYNLIE
LPAVNTLEDEYPRIESESTVNIGVGEPDFILGQLYHLSSVQAPEVAKSWAALASWAYRWG
RKVVDNASQGEGVRLLPREKSEVQNLLPDNVAEEDKEKIYGILGQAVCRPAGIQDEDMTL
QITENEDNEEDDMVDVIWRQLLTSCPWLSDLDENATEGLIKVWRKVVDRIFSLYKLSCSA
YFTFLKLNAGQVPLDEEDPRLHLRNTSEQSTDDVIVMATLRLLRLLVKHAGELRQYLEHG
LETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTISLSSE
SQTSGNKLPSAIPTLLGNIQGEELLGGECDEGSTPASQESSKDDTKAGLNEDQAMMQDCY
SKIVEKLSAANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKR
VQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIEN
ALEKLKNPLNPAKPGSSWLPFKEVMLSLQQRAQKRASYLLRLEEISPWLAAMMNTEIALP
GEVSTRDTVTIHSVGSTITILPTKTKPKKLLFLGSDGKNYPYLFKGLEDLHLDERIMQFL
SIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQA
QKAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPLNVMRAVLEELMEA
TPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEV
VHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGVTGVEGVFRLSCEQVLHIMRRGRETL
LTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAENKQSKREMERDITRSLFSSRVAEI
KVNWFKNRDEMLAVLPKLDSSLEEYLNLQEQLTDVEKLQGKLLEEIEFLEGAEGVDHPSH
TLQHRYSEHTQLQSQQRAVQEAIQVKLNEFEQWITHYQTAFSNLEATQLASLLQEISTQM
DLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGAFLQQRRSVLRGCLEQLHNYATVALQ
YPKAVFQKHRIEQWKTWMEELICNMTIERCQDIFRKYEMQYAPQPAPSVCQFITATEMTL
QRYAADINSRLIRQVERLKQEAVTVPVCEEQLKEIERCIKVFLHENGEEGSLSLASVIIS
ALCALTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTCLVQLLKQCHLVPQ
DLDIPNPMEASEAVHLANGVYISLQELNSNFRQIIFPEALRCLMKGEYTLESMLHELDNL
IEQTTDGVPLQTLVESLQAYLRNAAMGIEEETHTHYIDVARVLHAQYGELIQPRNGSVDE
TPKMSAGQMLLVAFDGMFAQVETAFGLLIEKLNKMEIPLAWRKIDIIREARSTQVNFFDD
DNNRQVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGIGSIEDQNAVNGPVQIVNVKALYRN
SCFSEDQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSFISALGVDIIAQVEAKDFGAES
KVSVDDLCKKAVEHNIQIGKFSQLAAETASLEEQLQGWGEVILMTDKVLRWERAWFPLAL
MSVVSFSFLMIYYLDPSVLSGVSCLVMFLCLADYLVPALAPRIFGSNKWTTEQQQRFHEI
CGNLVKCRRRIVGWWKRLFTMKEEKPKMYFMTMVFTLAVVAWIGQQVHNLFLTYLIVSFL
LLFPGLNQHGIITKYIGMAKREINKLLKHKEKKNE
NT seq
9648 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcacaggagcgaccgttgtcttattctgacgagtctcgactgtcaaatctt
cttcggaggattactcgggaagacgacagagaccgaagactggctactgtaaagcaactg
aaagaattcattcagcaaccagaaaacaaactggtacttgttaaacaactggataatatc
ctgactgccattcatgatgtgctcaatgaaagtagcaaattgcttcaggaattgagacag
gaaggagcttgctgtcttggccttctttgtgcttctctgagctacgaggctgagaagatc
tttaaatggatttttagcaaattcagttcatccacaaaagatgaggttaaacttctttat
ttgtgtgcaacctacaaagcactagagactgtaggagaaaagaaagcattttcatcttta
atgcagcttgtaatgaccagcctgcagtccatcctagagaatgttgatacaccagagtta
ctgtgcaagtgtgtcaagtgcatccttctggtgtctcgatgctacccacacattttcagc
accaattttagggacacagtggacatcctggttgggtggcacatagatcatacccagaaa
ccttctttgacacaacaggtctctggatggctgcagagcttggagcccttttgggtggct
gatctaactttttctaccacactcttgggtcagtttttggaagatatggaggcttatgct
gaggacctgagccacgtggcgtcaggggagtcagtggatgaggacattcctcccccgtcg
gtgtcgctgcccaagctggccgccctgctgagggtgttcagcaccgtggtgaggagcatc
ggggagcgcttcagccccatccggggcccacccatcacagaagcctatgtaactgatgtt
ctgtacagagtaatgagatgtgtgactgcagcaaaccaagtgttcttttctgaagctgtg
cttacagctgccaatgagtgtgttggggttttacttggcagcctggatcccagtatgacc
atacactgtgacatggtcatcacctatggattagatcagatggaaaattgtcagacttgt
ggcactgactacgtcatttcagtcctgaatctgttgacactgattgttgaacaaataaat
acaaaactaccatcatcatttgtagagaaattatttataccagagtctaaactacttgtt
cttcgttatcataaggagaaagaggtcgttgcagcagcccttgctgtataccaagctgta
ttgagcctgaagaacattcctgttctggagactgcttacaggttgattctaggagaaatg
acctgtgctttaaatagtctactccatagtttacatcttcctgaagcctgttctgaaatc
cagcatgactctttcaagaagcttatatccaatgtggataatgccaagtttgttgttata
tttgacctcagtgctctgagtactattggaaatgctaaaaactcattaattgggatgtgg
gccctttcaccaactgtgtttgcactgctgagtaaaaacctgatgattgttcatggtgac
atagcagttcacttccctgctgtccagtatgcagtgctctacacactgtactcacactgc
tccaggcatgaccatttcatatccagtagcctcagttcttcctctccctctctgtttgat
ggagcagttataagtactgtaactacagcaacaaaaaaacatttctcaatcatactgaac
cttttggggctactgcttaagaaggataaccttactcaagataccaggaaactacttaca
acatgggctttggaagtggctcttctgatgaagaagtcagaaacatatgcaccgttattt
tctctcccatcttttcataacttttgcaaaggacttttagcaaacacacttctggaagat
gtgaacatttgtcttcaagcatgtagtagcctccatgccctgtcttcctcccttccagat
gaccttttacagaggtgtgttgatgtgtgtcgtgttcagcttgtccacagtggtgctcgt
gtgagacaagcttttggaaagctgctgaagtcaattcgtttggatgttgtgttgagtaac
cgtacccacactgaaatacaagaaatttccttggctataagaagtcacatgagcaaagct
ccaagtaacacattccacccacaggatttctctgatgtcatcagttttattttgtatgga
aacctccaccgaactgggaaggataactggttagaaaggttattctatagctgtcaaagg
ctggacaagagggatcagcccaccatccctcgcaacctgctgaagactgatgctgtgctg
tggcagtgggctgtctgggaagcagctcagttcactgtgctctcaaagctaagaactcct
ctggggagagcccaagatacatttcaaacaattgaaggtattattaggagccttgcagcc
cacacattaaaccctgatcaagatgtcagccagtggactactgcagacaatgatgaagga
cacagtagcaaccagctcaggcttgttctccttctgcagtatttggagaacttggaaaaa
ctgatgtacaatgcttatgaaggatgtgccaatgcccttacctctccacccaaggttatc
aggacgttcttttacaccaaccgccagacgtgccaggactggctgacacggattagactg
tccatcatgagggttggattgctggctggccagcctgctgtcacagtcaggcatggattt
gatttactcacagaaatgaaaactaataatagtatctctcagggaaatgaattggaagtg
acaattatgatgctggtagaagcattatgtgagcttcactgtcctgaagctattcagggt
attgctgtctggtcttctgctgtagttgggaagagcctctcctggatcaattctgtagct
cagcaagcagaaggacggtttgaaaaagcaactgcagaataccaggagcacctctgctcc
atgactggagtggattgctgtataacaggctttgacaagactgttctgaagttggccaat
tccaacagtgtgaacaatgccagcccaaagcattccttgaatggagaaactagaaaaact
gttctgactaagccaagtgagtcttcacctgaagtgataaactacctgggtaacaaagca
tgtgaatgttacatttccattgctgactggtctgctgttcaggagtggcaaaacatggtc
catgaactgaagaaaagcaatagtaatacctcaatcaacctgaaagcagattttaactac
ataaaatctttgagcagctttgagtctggacaacttactgaatgcactgaacaactagaa
ttattaccaggagaaaatatcaacctgcttgcagggggatccaaagaaaaaatagacatg
aagaagctccttcctaatatgctaagtcctgatccaagagaacttcaaaaagcagttgaa
gtacagcttttgagaagttcagtatgtctggcaacagctgtaaaccacatagaacaggag
caaaagtggcagtcaatatctgaaaatcttatcaagtacctgaaacaaacctcccgcatt
gccattgggcctttgaggctttccacgctcaccgtgtctcagtctttgccagtgttgagc
actcttcagttgtactgttcttctgctttggaaaacactgtatgcaacaggctgacatca
gaggactgtctgatacctctcttcaatgaagcattgaggtcatgcaagcagcacgatgta
aggccatggatgcatgccctgaggtacacggcctaccagaatcagctgatggaaaagctt
aaagaaccaacagtcccaattaaaagccatctcatggagctgggcttaacagcagcgaag
tttgcacggaagcgagggaacatcgccctggccacgcggctgctggcgcagtgcagcgag
gtgcagctggggaaaaccaccactgcacaggacctagtccagcactttaaaaaactgtct
gcaccaggtcagatagatgaaaaatggggtcctgaacttgatattgagaaaacaaagttg
ttatacacagcaggtcagtcaacacatgccatggaaatgctgagttcttgtgccatatct
ttctgcaaatctgccaaagctgaatatgcagttgctaaatctattctcacactggctaaa
tggattcaagcagaatggaaagagatctcaggacagctgaaacaagtatatagagctcaa
cagcagcagaatcacagtggcctgactaccttgtctaaaaacatatacaatttgattgag
ctgccagctgttaatacactggaagatgaatatcctaggattgaaagtgaatctacagta
aacattggagttggagaaccagacttcatcttgggccagctgtatcacttgtcttctgta
caggcacctgaagtggccaagtcttgggcagccctggctagctgggcttacagatggggc
cgcaaagtagttgataatgccagtcagggagaaggtgttcggctgctgccccgggagaag
tccgaggttcagaacttgctcccagacaacgttgcagaggaggacaaagagaaaatctat
ggcattcttgggcaggcagtgtgtcggccagctggcattcaagatgaagatatgactcta
caaatcactgaaaatgaggacaatgaagaagatgatatggtggatgtgatatggcgccag
ttattaacaagttgtccctggctttcagatcttgatgaaaatgcaacagaaggattaatt
aaagtctggaggaaagttgtagacagaatcttcagtctctataaactgtcctgcagtgca
tactttacattcctcaaactgaatgctgggcaggttccacttgatgaagaagatcccaga
ctgcacttaagaaacacctctgagcaaagcacggatgatgtaattgtgatggcaaccctg
agactgttacggttgcttgtgaagcatgctggagagcttagacagtatctagagcatggg
ctagaaactacacctactgctccttggagaggaattattccccagcttttctcccgcctc
aatcacccagaggtgtacgtacgtcagagcatttgcaacttgctctgtcgagttgctcag
gattctcctcacctcatcctctatcctgcaatagtgggaaccatttcactgagcagtgag
tcccagacttcaggaaacaagctgccttctgccatccctactttgcttggtaatatacaa
ggagaagaactgttgggtggtgaatgtgatgaagggagcactccagcttcccaggaaagt
agtaaagatgatacaaaagctggattaaatgaagaccaagcgatgatgcaagattgctac
agcaaaattgtggagaaactctctgctgcaaatccaacaatggtattgcaggttcagatg
cttgtggctgagctgcgcagggtcacggttctctgggatgagctgtggctgggagttctc
ctgcagcagcacatgtacgtcctcagacggattcagcagctggaagatgaagtcaagagg
gtccaaaacaacaacactctacggaaggaggagaaaatagcaatcatgcgtgagaagcac
acagctctgatgaagcccattgtgtttgctctggagcacgtgaggagcatcactgcagct
cctgcagaaactcctcatgagaaatggtttcaggataactatggagatgcaattgaaaat
gcgctagagaagcttaagaatcctttgaatcctgctaaacctggaagcagctggctccca
tttaaagaggtaatgctgagcttgcagcaaagagcacagaaacgggctagctatctctta
aggcttgaagaaatcagtccttggctggctgccatgatgaacactgagatagcacttcct
ggagaggtgtccaccagggatacagtcaccatccacagtgtgggcagcaccatcaccatc
ctgccaaccaaaaccaaacctaaaaagttgctcttcctgggttcagatgggaagaactat
ccctacctgttcaaaggtttggaagacttgcacctagatgagaggatcatgcagttctta
tccattgtgaacaccatgtttgccacgatcaaccggcaagagacgccgcggttccacgcg
cggcactactcggtgacacccctggggacaaggtcaggcctcatccagtgggtggatgga
gccacgcctctctttgggctgtacaagcgctggcagcagcgggaagctgctctgcaggca
caaaaggcccaggactcttaccagacccctcagaaccctggaatagttcctagacccagt
gaactttactacagtaaaattggacctgctctaaaggcagttgggcttagtctcgacgtg
tcacgtcgtgactggcccttgaatgtcatgagggctgttctggaggagctgatggaagca
actcccccgaatctccttgccaaggagctctggtcatcctgtaccacaccagatgagtgg
tggagagttacacagtcgtatgcaagatccactgcagttatgtccatggttggctacatc
attggtcttggagacagacatctggataatgttcttatagatatgactacaggagaagtt
gtccacatagattataatgtttgctttgaaaaagggaagagccttagggtgccagagaag
gttccgttccggatgacacacaacattgaaacagctctgggagtgacaggagtggagggg
gtgttcaggctttcttgtgagcaggtcctgcatataatgcggcgtgggagagagactttg
cttacactgctggaggcttttgtttatgatccactggtggactggacagctggaggagag
gcaggatttgctggggctgtctatggtggtggtggccagcaggctgaaaacaaacagagc
aaaagggaaatggaaagggatattacacggagtctcttttcctcgagggtggcagagata
aaggttaactggtttaagaacagagatgaaatgcttgctgtgctgccaaaactggacagt
agtttagaagagtacctgaacctgcaggagcagttaacagatgtagaaaagttgcaagga
aaactactggaagagatagaatttctggaaggtgcagaaggagtggatcatccctcccac
acacttcagcacaggtattctgagcacacacagttgcagtctcaacaaagagctgtccag
gaagccatccaggtgaagctgaatgagtttgagcagtggataacccattaccaaactgcc
ttcagtaatttagaggcaacacaacttgcaagtctgctccaagaaatcagcacacaaatg
gacctaggtcctccaagttatgtcccagcaacagcatttctgcaaaatgcaggccaggca
catctaatcagccagtgtgaacagctggaaggagaggttggtgcttttctgcagcagaga
agatctgtgttacgtggctgcctggaacagctgcacaactatgcaacagtggctctgcag
tacccaaaggctgtgttccagaagcaccgaatagagcagtggaaaacctggatggaagag
ctcatctgtaacatgacaatagagagatgtcaggatatctttaggaagtacgagatgcag
tacgcgccccagcccgcgcccagcgtgtgccagttcatcacggccacggagatgacgctg
cagcgctacgcggccgacatcaacagccgcctgatccggcaggtggagcgcctcaagcag
gaggccgtcaccgtgcccgtgtgtgaggagcagctcaaggagatcgagcgctgcatcaaa
gtgttcctgcacgagaacggcgaggagggctcgctcagcctggccagcgtcatcatctct
gctctctgcgccctcaccaggcgaaacctgatgatggaaggtgcagcgtccagtgctgga
gagcagctggttgatttgacatccagagatggagcctggttcctggaggagctttgcagc
atgagtggcaatgtcacgtgcctcgtgcagctgctgaagcagtgccatcttgtaccccag
gacttggacattcccaaccccatggaagcatcagaagctgttcacttagccaatggagta
tatatctcacttcaggaattgaactccaacttcaggcagatcattttccctgaagcactg
aggtgcttaatgaaaggagagtacactttagaaagtatgctccatgagctggataatctc
atagagcaaacaactgatggagtccctttgcaaacgctggttgaatctcttcaagcctac
ttaagaaatgctgctatgggtatagaggaggagacacacactcattacattgatgttgca
agagttcttcatgctcagtatggtgaactgattcagcccagaaatggttcagttgatgaa
actcccaaaatgtcagctggtcagatgcttttggtagcttttgatggaatgtttgctcaa
gtggaaactgcctttggtttattgattgaaaagctaaacaagatggagatacctcttgct
tggcgtaagattgacataatcagggaagcccgcagcacccaggtcaacttctttgatgat
gacaataatcggcaagtgctggaggagatcttctttctgaagagactgcaaacaattaaa
gaatttttcaggctctgtggtaccttttctaagacactgtcaggaatcggttcaattgaa
gatcagaatgcagtaaatggacctgttcaaattgtcaatgtgaaagccctttacaggaac
tcttgttttagtgaagatcaaatggccaagccaattaaggcttttacagcagactttgtg
aggcagcttttaattggccttccaaatcaagctttgggactgaccttgtgcagtttcatc
agcgctctgggtgtcgatatcattgctcaagtagaggctaaagactttggagcagaaagc
aaagtttctgtggatgacctgtgcaagaaagctgtggagcacaacatccagattggcaag
ttctcccagctggcagctgaaactgcaagcttggaggagcagttgcaaggatggggagaa
gtgattctgatgacagataaagttctgcgctgggagcgagcctggtttcccctggcactg
atgagtgttgtttccttctccttcctgatgatctactatttggacccttcagttctctca
ggtgtctcctgtttggtcatgttcctctgtttggctgattacctggttcctgctcttgct
cctcggatctttggctctaataagtggaccacggagcagcagcaaaggtttcatgagatt
tgtggcaatttggtgaagtgtcgccgccggattgttggctggtggaagcgtctcttcact
atgaaggaagaaaagcctaaaatgtacttcatgaccatggtcttcactcttgctgtggtt
gcctggattggacagcaggttcacaatctctttctgacctatcttattgtaagcttcttg
ttgctgtttcctggactaaaccaacatgggatcatcacaaagtacattggaatggcgaaa
agggagatcaacaaacttctcaagcacaaggaaaagaaaaatgaatga
DBGET
integrated database retrieval system
