Zonotrichia albicollis (white-throated sparrow): 102074706
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Entry
102074706 CDS
T07911
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
zab03450
Non-homologous end-joining
zab04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102074706 (RAD50)
03450 Non-homologous end-joining
102074706 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102074706 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zab03032
]
102074706 (RAD50)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102074706 (RAD50)
DNA replication proteins [BR:
zab03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102074706 (RAD50)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102074706 (RAD50)
BRCA1-C complex
102074706 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
102074706 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
AAA_15
DUF2703
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
102074706
NCBI-ProteinID:
XP_005483629
Ensembl:
ENSZALG00000009501
UniProt:
A0A8D2MRS0
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGKTFVHDPKIANETDVRAQIRLQFRDVNGEVMAVQRSMICTQKSKEPEFKTLESVITK
TKHGQKVSLSSKCAEIDREMINALGVSKAVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALEALRQVRQKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VISIENQLEPLKSSLAVVEQNLTKVMRLDNDVKALESRKRQMEKDNQDLQQKMEEIFQGT
DEQLRDKYQNHQRTVKEKEKRLLDCKRDLDRATKECQRFNSEKSELLVERGRLQLQADRH
QEHIVTRDSLIQSLAAQLELDGFERAPFTDRHIASFHRLVKDRQDRDTEAANRMMREFAQ
KETMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQAELKNVKCELQQLEGFSDRISELDEE
IGKMEHDLEKAERNSNIETLEQEVQTLQNEKINLDRALRRLDQEMEQLNLHTTTITQLEM
LKKDKAEKEDQIRRVKSRHSEELTSLLGYFPNKKQLEDWLHGKNKKINQTRDTLANLNKR
LASVEYDKTYASNELKKKETQLSSHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDKEIPDLRNKIQNANRDLTGLKGEIEEQELLLQTALS
EEEGAKACLQDITLMERYQTDIRDVERKIAQQEAKLLGVNLNRTVLQVSREKQEKKQLWD
TVTSKIELNQKHKQDQQSQIQQLKSAVNELKAEKLQIVSSMQRRRQLEEQTVELTTEVQS
LCREIKEAEEQVLPLEAKLDKLQQEKEELVNKRTASNKETQEKMNNINEKVKDINKYVKE
IENYIQQGKEDYKKQKESELEEVNSRLAACEKQKEKISEVMEKTRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDDIKKLMKEMGEMKVPQMKNEQKRLEEKIESLKRNHHVALGRQRG
FEEEIVRFRKELREPQFRDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSIYRGQDIEYIEIRSDADENASATDKRRNYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCINCGILALDEPTTNLDRENIESLAHALVEIIKSRFHQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggattgaaaaaatgagcatcctcggagtgaggagtttcgggatagaagataaa
gacaaacaagttatcactttctttagtccgttaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggtgattttcctcctggc
accaaaggaaaaacatttgttcatgatccaaagattgccaatgaaacggacgtgcgagct
cagatccggttacagttccgagatgtcaacggggaggtcatggctgtgcagcgctccatg
atctgcacccagaaaagcaaggaacctgagtttaaaacactggaatctgtcattactaaa
acaaagcatggtcagaaggtcagtctgagttccaagtgtgctgaaatagatcgggagatg
atcaatgcccttggtgtttccaaagctgtgcttaacaatgtcattttctgtcaccaagaa
gaatccaactggccgttaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtacatcaaagctctcgaagctctgcgtcaggtacggcagaaacaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatatctgaaacagaataaagagaaagca
caggaaatccaggatcatctcagcaacagagaagctcagctggctgcttctaaggagaat
gtaatatcaattgagaaccagcttgagcctctaaagagctctctggcagtggttgagcag
aatctcacaaaagtaatgaggttggacaatgatgtgaaggccctggagagcaggaagcgg
caaatggaaaaagataatcaagatttgcaacagaagatggaagagatttttcaaggaaca
gatgaacaactaagggataaataccagaaccaccagagaacagtgaaggagaaggagaag
agattgttggactgtaaacgtgatttagatagagccactaaagagtgccagagatttaac
agtgagaaatcagagctgcttgttgaacgaggtcgtcttcagctgcaggcagatcgtcac
caggagcacattgtgaccagggattccttaattcagtctctggcagcacagctggagttg
gatggctttgagagagcccctttcactgacaggcacattgccagttttcacaggctggtg
aaggacaggcaggacagggacacagaagctgcaaatcgtatgatgagagaatttgcacag
aaagaaacaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagcagagctgaagaatgtc
aaatgtgaattgcagcagttggagggattttcagacaggattagcgagttggatgaggag
attggcaagatggaacatgatctggagaaggctgagaggaacagcaatatagaaacactg
gaacaggaagtacagactctgcaaaatgagaaaataaacctggacagagctcttaggagg
ttggatcaagagatggagcagttgaatctgcacaccacaaccattacccaattggagatg
ctgaagaaagacaaagcagagaaagaagatcagatcagaagagtaaagtcaagacattct
gaggaactaacatcattgctgggatactttcccaataaaaaacaacttgaagactggctt
catggtaaaaataaaaagattaatcagacaagggatactcttgctaatctgaacaagcga
ctggcatcagtagaatatgataaaacttatgccagtaatgagctaaagaaaaaagaaacc
cagttgtccagtcatgaagcaaaactttttgatgtttgtggaagtcaagattttgacagt
gacctgaacaaacttcaagatgaaattgaaaaaagttccaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacagctgacagaggagaaccagtcttgt
tgtccagtttgccaaagagtttttcagacagaggctgagctgcaggatgtcatcagtgat
ctgcagtccaaactgcgcctggccccagacaaactgaagtccacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtctgaaacccctgcggcgaactgtggtt
gaactccaagataaggaaattccagacctgaggaacaagatccagaatgcaaacagagat
ttaacaggcctgaagggtgagatagaagaacaggaattacttcttcagacagctttgtct
gaggaagaaggtgccaaagcatgtttacaggatataactctgatggaaaggtatcagact
gatatcagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggtgtcaat
ttaaataggactgtgcttcaagtaagcagagaaaaacaagagaaaaaacagctgtgggat
acagttaccagtaaaattgagttaaatcagaaacacaagcaggaccagcaaagccagatc
cagcagctgaagagtgcagtgaatgagctcaaggcagagaagctgcagattgtcagcagc
atgcagcggcggcggcagctggaggagcagactgtggagttaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcagaagaacaggtacttcctttggaggcaaagttagac
aaattgcagcaggagaaggaggaactagtgaataaaaggactgcaagtaataaagaaaca
caagagaagatgaataacataaatgagaaagttaaagatataaacaagtacgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaggagtctgaactt
gaagaagtaaattctcgtttggctgcctgtgagaaacagaaggaaaagataagtgaagtg
atggaaaagacccgacaagatattgacactcaaaagatccaggagaggtggctggaggat
aatctcaccttgaggaagcggaatgaggagctaaaagaagttgaagatgacataaaaaaa
cttatgaaggagatgggagaaatgaaagtcccccagatgaaaaatgagcagaagcgtttg
gaggagaagatagaatccctgaagaggaaccaccacgtggcccttggccggcagcggggc
tttgaggaggagatcgttcgcttcaggaaggagctccgagagccccagttcagagatgca
gaggagaaatacagggacatgatgattgtcatgagaaccacagagctggtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaaaatg
gaagaaattaacaaaataattcgggacctgtggcgaagcatttacagaggacaagatatt
gaatatatagaaatccgctctgatgcagatgagaatgcctcagccactgacaagagaaga
aattacaattacagggtggtgatggtgaagggagatacagcactggatatgagaggaagg
tgcagtgctgggcaaaaggtgcttgcttctctcatcattcgccttgctctagcagaaaca
ttctgtatcaactgtggcattctggccctggacgagcctacaaccaacctggaccgagag
aacatcgagtccctggcacatgccctggtggagataataaagagccgcttccaccaacgc
aactttcagctgctggtgattactcacgatgaagattttgtggaacttctgggccgttct
gagtatgtggagacattctacaggataaagaagaacattgatcagtgctctgagatcatg
aaatgcagtgtcagttccttaggctcctatgttcattag
DBGET
integrated database retrieval system
