Zonotrichia albicollis (white-throated sparrow): 102075455
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Entry
102075455 CDS
T07911
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zab00536
]
102075455 (COL25A1)
Glycosaminoglycan binding proteins [BR:
zab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102075455 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102075455
NCBI-ProteinID:
XP_026647817
Ensembl:
ENSZALG00000005507
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MMQEKVERLLAQKSYEHLAKIRVAREAAPECSCPPGPPGKRGKRGRRGETGPPGPIGMDG
KLGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG
PPGPPGPRGPPGDTGKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDG
QVGEPGLPGIAGEKGEAGLKGDPGERGEKGDAGENGLKGDTGEKGDPGSSAAGIKGEPGE
SGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEP
GIPGPKGKTGEPGSRGPKGSKGDTGERGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEA
LQRIATLTVTGPPGPPGPQGLQGPKGEPGSPGVPGGDGEQGPKGSKGDSGDPGMPGEKGG
IGLPGLPGANGMKGEKGDVGLPGAQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLN
GLKGLKGEPGQKGDRGPLGLPGIDGPVGPHGPAGPKGERGEKGTVGDPGPRGPYGLPGKD
GEPGLDGFPGPRGEKGDIGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGC
WQK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagaaagtggagcgacttctcgcccagaaatcctacgagcacttggccaaa
atacgagtagcgagagaagcggctccagagtgcagctgcccaccaggtcctccagggaaa
agaggtaagcggggaagaagaggagagactggacctcctggtccgattggtatggatgga
aagctgggtcagcctggtcctcaaggccctcctggtccaaaaggcgagaagggagatcaa
ggtgatcagggccctcggatggtgtttcctaaaatcaatcatgggtttctgtctgctgat
cagcagctcattaaacgccgcctcattaagggggaccaaggacaggctggaccccctgga
cctccagggccaccaggacccagaggtcccccaggagacaccggcaaagatggtcctcgt
gggatgcccggcttaacgggtgaaccaggaaaaccaggagaacaaggattgacaggacct
caggggcctccaggacaaaagggttctgttggagtgcctggtgttccagggagggatgga
caagtgggtgaacctggtttgcctggcatagcaggagagaagggagaagcagggctcaag
ggtgaccctggagaaagaggagagaagggggatgctggtgagaatggactgaagggtgac
acaggagaaaagggtgaccctggctcttctgcggctggaattaagggtgaacctggtgaa
tctgggcggcctggacagaagggtgaaccaggccttcctgggcttcctggactccctgga
ataaagggggaaccaggtttcattggtccacaaggagaacctgggttgccagggctgcca
ggaacaaagggtgacagaggagaggcaggccctgttgggaagggtgagcgaggggaacct
ggaatccctggaccaaaggggaaaacaggtgaacctggatctagaggccccaaagggtca
aagggtgatacaggtgagagaggtgacacaggatctgcaggtccacggggaccacctgga
cagaagggtgatcaaggtgcaacagagataattgattataatggcaatatccatgaagct
ctgcagcggattgccaccctgactgtcacgggaccaccaggaccaccaggaccccaaggg
ctgcaagggccaaagggtgaaccaggatccccaggagttccaggaggtgatggagagcag
ggtcctaagggctcaaaaggagactcaggtgatcctggaatgcccggagaaaagggagga
attggactgcctggcctaccaggagccaatggcatgaaaggcgaaaaaggagacgttggt
ttgcctggtgcccaaggtccttcaatgataggaccacctggaccaccagggccacatggt
cctccaggccccatgggacctcatggactgcctggcccgaagggtgaaccagggttaaat
ggtcttaaaggattgaagggtgaaccaggtcaaaagggtgacagagggccccttggtctt
ccaggcatagatggcccagttggtccccatggccctgcaggtcccaaaggagagagaggt
gagaagggaactgtaggtgaccctggacccagaggaccatatggcttgcctggcaaagac
ggcgagcctggccttgatggtttccctggtcctcgaggagaaaagggtgatataggagaa
aagggagaaaagggattccgtggaattaagggggaaaaaggggagccaggccagcctggc
ctggatgggctggatgccccttgccaattgggtcctgatggattaccaatgcctggctgt
tggcaaaagtga
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integrated database retrieval system
