Zhongshania aliphaticivorans: AZF00_02260
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Entry
AZF00_02260 CDS
T04315
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AZF00_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zal03021
]
AZF00_02260
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_02260
Enzymes [BR:
zal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AZF00_02260
Transcription machinery [BR:
zal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AZF00_02260
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AZF00_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AMO67193
UniProt:
A0A127M1S8
LinkDB
All DBs
Position
513013..514014
Genome browser
AA seq
333 aa
AA seq
DB search
MQSAVNEFLTPRVIQVEEFGQTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAITEVE
IDGVLHEYSAMEGVQEDVIEILLNLKEVAVIMHGKDQAILSLNKKGPGVVTAGDIQTDHE
IEIVNTDHVIANLNDDGEINMRLTIARGRGYVPADARDNGEEETRSIGRLQLDASYSPIS
RVSYVVESARVEQRTDLDKLVLDLETNGTIDPEEAIRRAATILQQQLAVFVDLESEGENE
PSREENEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGLRLDNWPPASLRNDDRVLA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgctgtcaatgaatttttaaccccgcgtgtcatccaagttgaagaatttggc
cagactcgcgcgaaagtgaccttagaaccgcttgagcggggatttggtcataccctgggt
aatgccttgcgccgtattttgctgtcttctatgccgggctgtgcaatcaccgaagttgag
attgacggtgtattgcatgagtacagtgcaatggaaggtgtgcaggaagatgttattgaa
atcctgcttaacctgaaagaagttgcagtaatcatgcacggcaaagatcaagcaattttg
agcttgaacaaaaaaggcccgggtgttgttactgcaggtgatatccagactgatcacgaa
atcgaaattgttaacaccgatcacgttattgctaacctgaacgacgacggcgagattaat
atgcgtctgacgatcgctcggggtcgcggttacgtgccggccgacgctcgtgataatggc
gaagaagaaacccgctcaatcggtcgtcttcaattggatgccagctacagcccaatcagt
cgcgtaagttatgtggttgagagtgctcgtgttgagcagcgtactgacttagataaattg
gttcttgatttagagaccaacggtacgattgatcccgaagaggcgattcgccgcgcggca
accatacttcagcagcagctggcagtattcgttgaccttgaaagcgaaggtgagaacgag
ccatcacgtgaagagaacgaagtagatcctattctgctgcgtccggtagatgatttagag
ctgacagtgcgctctgccaactgcctgaaagcagaaaatatctactacatcggtgatttg
gtgcagcgcacagaagttgaacttctgaagacgccaaaccttggtaagaagtcgctgacc
gaaattaaagacgtattggcatcgcgtggtttgtctttgggtttgcgcctagacaactgg
ccgccagcaagtcttagaaacgacgaccgagtactcgcttaa
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