Zhongshania aliphaticivorans: AZF00_03020
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Entry
AZF00_03020 CDS
T04315
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_03020
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AZF00_03020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AMO67334
UniProt:
A0A127M287
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All DBs
Position
694749..695177
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AA seq
142 aa
AA seq
DB search
MTDVVSPKKRSEMMSGIRGKNTKPELIVRQELHRRGFRYRLHHKGLPGKPDLVFPKYKTV
IFVNGCFWHGHNCKLFKWPKSNPQFWKEKISGNQVRDEKQRKALEEGGWQVITVWECSLK
GKSPHDIMAEIDSISERLTQNG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgttgtaagcccgaaaaaacgctcggagatgatgtcgggcatacgtggaaag
aacacaaaacccgagcttatcgtcagacaggaactccacagacgcggatttcgctaccgg
ctgcaccataaaggcttgcctggaaagccagacctggtattcccgaagtacaaaaccgtc
atattcgtgaatggctgcttctggcacggccacaactgcaagctatttaaatggccaaaa
tcaaacccccaattctggaaagagaaaatatccggaaaccaggttagggatgaaaagcaa
agaaaagctcttgaagaaggcggctggcaggttataacagtctgggagtgctcactaaaa
ggcaaatctccacatgacatcatggctgaaattgatagtatcagtgagcggctaacacaa
aacggataa
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