Zhongshania aliphaticivorans: AZF00_03590
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Entry
AZF00_03590 CDS
T04315
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AZF00_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zal03019
]
AZF00_03590
03009 Ribosome biogenesis [BR:
zal03009
]
AZF00_03590
Messenger RNA biogenesis [BR:
zal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZF00_03590
Ribosome biogenesis [BR:
zal03009
]
Eukaryotic type
Pre-60S particles
RNases
AZF00_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF7351
Ribosomal_L10
Apc5_N
Motif
Other DBs
NCBI-ProteinID:
AMO67439
UniProt:
A0A127M2J1
LinkDB
All DBs
Position
816569..817114
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AA seq
181 aa
AA seq
DB search
MAKAQNLIWIDLEMTGLDTLNDHIIEIATVVTDSDLNVLAEGPVLAIHQPDEVLAAMDEW
NTRQHGESGLVKRVQDTCITALEAERLTLAFLDKHVEKGASPMCGNSICQDRRFMAREMP
ELEAFFHYRNLDVSSVKELARRWRPELMKGLKKSGAHLALDDIRDSIAELQYYREHFIRL
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcacaaaatcttatttggattgacctggaaatgacgggtttagataccctc
aatgatcacatcattgaaattgcgacggtggtgaccgacagcgacctcaatgtgttggcc
gaggggccggtgttggcaattcatcagccggacgaggtgctcgcggcgatggacgagtgg
aatacgcgtcagcacggcgagtcgggcttggttaaacgagtgcaagacacctgcattact
gcgctagaggccgaacgtttaaccctcgcctttctcgataaacacgttgagaagggtgct
tcgccaatgtgtggcaatagtatctgtcaggatcggcgctttatggccagagaaatgccc
gagctagaagcgttttttcactaccgcaatctcgacgttagcagtgtaaaagagttggcg
cggcgctggcgtccagagttaatgaagggtttaaagaagtctggtgctcatttggcgctc
gatgatatccgtgattcgattgccgagcttcaatattaccgcgagcattttatccggctg
tcctag
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