Zhongshania aliphaticivorans: AZF00_06485
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Entry
AZF00_06485 CDS
T04315
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03030
DNA replication
zal03430
Mismatch repair
zal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZF00_06485
03430 Mismatch repair
AZF00_06485
03440 Homologous recombination
AZF00_06485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zal03032
]
AZF00_06485
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_06485
Enzymes [BR:
zal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZF00_06485
DNA replication proteins [BR:
zal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZF00_06485
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZF00_06485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
Cho_C
UvrC_M
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AMO67972
UniProt:
A0A127M429
LinkDB
All DBs
Position
1482150..1483685
Genome browser
AA seq
511 aa
AA seq
DB search
MLGFFISRKSTGIHFAEWPVLGNLRFALVDLETTGGQAKQDHIMEAAVRVVGGDIDLEWQ
SLIDPLCSVPSFIQGLTGISNGMLRGKPRFSDVQEALWSYLDGAILVAHNARFDAGFLRA
NFARYGRDYQPRVLCTLKLARTLYPDWPKHGLEAICARIGFYSEVHHRAMADVDAMKAFL
DYARIDKGEAVFNFEVGLLLGLPVLPPSIRQADIDAIPREPGVYRLLGEAGELLYLGSAR
SLQEQVLSHFENATGDSKAAKLLRRVDAVQWQMLAGELSAGLHLSVALRQEKPLLQRRAK
ALGKPCCVRFIMQDSGELQLRLRSGLPANIAQTGEAVGLFRERQHAKTRIRELAKEHQLC
LRRLAVLVEGEICECGACVLTAAGTGESVAVASAADFAARVKAAFAEYLYTPWPFAEPVL
IHEDNGAGFSECHLVYDWRHFGSFRWNAERGQLLELSGSAEPLDLAGARRICEQTQEFRY
EHYRLLRAFQHDLTWQPLSEFTATIGGEYTA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgctcggctttttcatttctcgtaaaagcacgggcattcactttgcggagtggccggtg
ttaggtaatcttcggtttgctttggtcgaccttgaaaccactggcgggcaggccaagcaa
gatcacatcatggaagctgcggttcgcgttgttggcggcgatattgatctggaatggcag
tctttaatcgaccctctttgttcggtgccttcatttatccaaggtcttaccggtataagt
aacggtatgttacggggcaaaccacgattttctgacgtgcaggaagccctgtggtcgtat
ttagatggtgccattttagttgcccataatgcccgctttgatgcggggtttttacgcgct
aattttgcgcgttatggccgcgactaccagccacgtgttttatgtacgctgaaattggcg
cgtaccttgtaccccgattggccaaagcacggtttggaggcaatctgtgcgcggattggt
ttttactcagaggtgcatcaccgggctatggccgacgtagatgcgatgaaagcttttctc
gactacgcccgcatcgataaaggcgaagccgtttttaattttgaagttggcttgctgttg
ggcttgccggtgttgccgccgtctattcgtcaggctgatattgatgcgattcctcgtgag
ccaggtgtttatcggttattgggtgaggcgggggagttgctgtatctgggtagcgctcgg
tctttgcaggaacaggtactttctcattttgaaaacgccacaggggacagtaaagcggca
aaattgttgcgccgagtagacgctgttcagtggcagatgctggcaggcgagttatctgcg
ggtttgcatttaagtgtggccttgcgtcaggaaaagccattgctgcagcgtcgcgctaag
gccttgggtaagccctgctgtgtgcgctttatcatgcaagacagtggcgagttacaactg
cgattgcgttctggcttgcccgccaatatcgcgcagaccggtgaggcggttgggttattt
cgcgagcgtcaacacgctaaaacccgtatcagagagttggcgaaagaacatcagctttgt
ctgcgacgtttggcggtgcttgttgagggggagatatgtgagtgtggtgcttgcgtttta
actgcagcgggaaccggtgagtcggtagcagtagcgtcggcggctgactttgctgcgcgc
gtaaaagcggcgtttgccgaatatctgtatacgccgtggccttttgccgaaccagtgttg
attcatgaggataatggcgcaggctttagcgaatgtcatttggtgtatgactggcggcat
tttggcagttttcgctggaacgctgaacgtgggcagttacttgaattaagcggctcagct
gaaccgctagacttggctggggcgcggcgtatatgtgagcaaacccaagagtttcgctat
gagcattaccgcttattgcgtgcctttcagcatgacttaacgtggcagccattgtcagag
tttactgcaacaataggtggagaatacacggcgtaa
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