Zhongshania aliphaticivorans: AZF00_07815
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Entry
AZF00_07815 CDS
T04315
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zal03032
]
AZF00_07815
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_07815
Enzymes [BR:
zal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZF00_07815
DNA replication proteins [BR:
zal03032
]
Prokaryotic type
DNA Topoisomerases
AZF00_07815
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZF00_07815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
CEP104_ZnF
DUF2399
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AMO68214
UniProt:
A0A127M4P1
LinkDB
All DBs
Position
1768993..1771695
Genome browser
AA seq
900 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSEFIVKSSIGHIRDLPTSGSAKASTVDPKERAKAAALT
RKMAPEEKEIHKKAKSRQQLIARMGIDPEKDWAAHYEILPGKEKVVSELKKLAENADTIY
LATDLDREGEAIAWHLREAIGGDASRYKRVVFNEITKKAIQAAFEKPTELDIDRVNAQQA
RRFLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLVVDREKEIRAFIPEEYWQIHTDNS
SAAGQLRLEVKKQAGANFRPDNEADAMAATAALRSAEYTVTAREDKPTKSHPSAPYITST
LQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDAVAACRDYISSNFPKAYL
PEAPKSYSSKEGAQEAHEAIRPSDVNIEPTQLAGMERDAERLYVLIWRQFVACQMASASF
TSTSVVVTAGDYELRTRGRVVLFDGFMKVQPPNVSKKEEDQELPDVKVGDRLELVKVDPS
QHFTKPSPRYSEAALVKELEKRGIGRPSTYAAIISTIQDRGYVRVDNRRFYAEKMGDIVT
DRLVESFSNLLDYSFTARMEELLDEVAAGDKNWKKLLDEFYSEFRKTLEAAEAEDAGMRN
NVPTGTDIPCPNCGRTMQIRTASTGVFLGCSGYALPPKERCKQTINLVPAEDFVSIDSDD
EEAESKVLRSKHRCGICNTAMESYVIDATRKLHICGNNPDCSGHEIEQGSFKVKGYEGPL
IECDKCGLDMQLKTGRFGKYFGCTGEDCKNTRKLLRSGEAAPPKMDPVPMPELQCEKVDD
HYILRDGAAGLFLAASGFPRNRETRAPLVKEILPHQSEIDEKYAFLFKAPAQDSAGRDAV
IRYSRKTKEQYVQTEVEGKPSGWAAFYENDKWVVREKAAKATSTKAAAKKAPAKKTKASK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatctttggttattgtggaatcgccagctaaggcgaagaccattaacaagtat
ttgggctccgagttcatcgtcaagtccagtattggccatattcgtgacctgccaaccagt
ggtagtgcaaaagccagcacggttgaccctaaagagcgtgctaaagccgccgcgctgaca
cgtaaaatggcgcctgaagaaaaagaaatccataaaaaggcgaagtcgcgtcagcaactt
attgcgcgcatgggtattgatccagaaaaggattgggctgcgcactacgaaattttgccg
ggcaaggaaaaggttgtcagcgagctgaaaaaattggccgaaaatgccgacaccatctac
ctcgcaacggatttggaccgcgagggagaggctatagcttggcatctacgcgaggctatt
ggcggtgacgccagccgttacaagcgtgtggtgtttaatgaaattaccaaaaaggccatt
caggccgcatttgaaaagccaaccgagctggatattgatcgggttaatgcccaacaagcg
cgccgtttcttagatcgcgtggtgggctacatggtatcaccattgctgtgggcaaaaatt
gcgcggggcctttctgcaggccgagtccagtcggttgcggtgcgcttggtggttgaccgc
gaaaaagaaattcgggcctttatacccgaggaatactggcaaattcataccgacaacagc
tccgctgcaggtcagcttcgtcttgaagtgaaaaagcaggcgggcgccaattttcgtcct
gataatgaagctgatgccatggctgcaacagcggctttacgcagtgctgaatacacggtc
actgcgcgtgaagataagccaacaaaaagtcacccgagtgcgccatatatcacctcgacc
ctgcagcaggccgcgagcacacggctaggctttggtgttaagaaaaccatgatgatggcg
caacgactctatgaggcgggttacatcacctatatgcgtaccgattcgacgaatttgagt
gtcgacgcggtagcggcttgccgggactatatcagcagtaatttccctaaggcatatttg
cccgaggctccgaagtcgtattcgagcaaggagggggcgcaagaagctcacgaagcaatt
cggccttccgatgtgaatattgaaccgacccaattggcgggtatggagcgggacgccgag
cggctttatgtattgatttggcggcaatttgtagcctgtcaaatggcgtctgccagcttt
accagcacctctgtcgtggttacggctggtgattatgaattgcgcactcgcggccgtgtg
gttttgtttgatggttttatgaaagtgcagccgccgaatgtgagcaaaaaggaagaagat
caagagctgcctgatgtcaaagtgggcgaccggcttgagcttgttaaagttgatcctagc
cagcattttaccaagccatcgccgcgttattctgaagctgcactggttaaagaattggaa
aaacgcgggattggccgaccgtcaacttacgccgcgatcatttctacgatccaagatcgg
ggttatgtgcgggtcgataatcggcgcttttatgctgaaaaaatgggcgatatcgttacc
gatcgcctcgtagaaagctttagcaatttattggattacagcttcactgcgcgcatggaa
gagctgctcgatgaagtggctgcgggtgacaaaaactggaaaaaactgctcgacgagttt
tattcagagtttcgcaaaacccttgaagctgccgaagccgaagatgcgggcatgcgaaat
aatgtgccgactgggacagatatcccatgtccgaattgcggtcgaactatgcagattcgc
accgccagcaccggtgtattcctaggctgttccggttacgcattgccgccgaaggagcgt
tgcaaacaaaccataaacttggtgcccgccgaagactttgtcagtatagatagtgatgac
gaagaggcggagtctaaggtgctgcgcagcaaacatcgctgcggtatatgcaataccgcc
atggaaagctacgttatcgacgccacgcggaaattacatatttgtggcaataaccccgat
tgcagtggtcatgagatagagcagggcagctttaaagtgaaaggctatgaaggcccactc
attgaatgcgacaagtgtgggctagatatgcagctcaagaccggtcgctttggtaagtat
tttggctgcaccggtgaagactgtaaaaacacccgcaagttgttacgcagtggtgaagcc
gcgccgccgaagatggatccagtgcctatgcctgagttgcagtgcgaaaaagttgatgac
cactatattcttcgcgacggcgcggcggggctatttttggccgcaagcggcttcccccgc
aatcgggagactagggcgccgctggttaaagaaatactgcctcatcagagtgaaattgac
gagaaatacgcctttttgttcaaggcgccagctcaagatagcgcgggtcgagatgctgtt
attcgctacagccgaaaaacgaaagaacagtatgtgcagactgaggtcgagggtaaaccg
tcaggctgggcggcgttttacgaaaacgataaatgggtggtgcgcgaaaaggcggcaaaa
gcgacctcaacaaaggccgcggctaagaaagcgcctgctaaaaagacgaaggcgagcaaa
taa
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