Zhongshania aliphaticivorans: AZF00_08305
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Entry
AZF00_08305 CDS
T04315
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zal03009
]
AZF00_08305
Enzymes [BR:
zal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
AZF00_08305
Ribosome biogenesis [BR:
zal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AZF00_08305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMO68305
UniProt:
A0A127M501
LinkDB
All DBs
Position
complement(1873536..1874186)
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AA seq
216 aa
AA seq
DB search
MSDIFIFNKPFQVMSQFTDSDGRATLADYIRIPAIYPAGRLDYDSEGLMILTGDGELQHQ
ISHPRHKLRKTYWAQVEGEISDDALAQLRRGVMLKDGPTLPAHAERITEPSSLWPRDPPV
RYRAAIPTSWLSLQISEGRNRQVRRMTAAVGFPTLRLVRAAIGDWSVDNLAPGEHRKITL
GDEFKRYASPRKPAARTPYRKTKGKTLGAKPRKRSP
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacatttttattttcaacaagccctttcaagtaatgagtcaattcactgactca
gatggccgggccaccctagctgattacatcaggatacccgccatttatccagcggggcgc
ctcgattatgactccgaaggcctaatgatattgactggcgacggtgagctgcagcaccaa
attagtcacccccggcataaattgcgtaaaacgtattgggcgcaagtggaaggcgaaatc
agtgacgatgccctcgctcagctgcgtcgcggggtaatgcttaaagacggacccaccctg
cccgctcacgccgaacgcatcaccgaaccctcctcactgtggccacgagaccccccagtg
cggtaccgggcagccattccgacgtcatggcttagcttgcaaataagtgagggccgcaat
cgtcaagttcggcgtatgaccgccgcagtgggatttccgaccctgcgcctcgttcgcgcc
gcaataggcgactggagcgtcgacaatctcgcccccggcgaacaccgcaaaatcaccctt
ggcgatgaattcaaacgttacgccagccccaggaaaccggcagcaagaacaccttatcgg
aaaaccaagggcaaaacccttggcgccaaaccgcgcaaacgtagtccttaa
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