Zhongshania aliphaticivorans: AZF00_12420
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Entry
AZF00_12420 CDS
T04315
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03030
DNA replication
zal03430
Mismatch repair
zal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZF00_12420
03430 Mismatch repair
AZF00_12420
03440 Homologous recombination
AZF00_12420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zal03032
]
AZF00_12420
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_12420
Enzymes [BR:
zal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZF00_12420
DNA replication proteins [BR:
zal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZF00_12420
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZF00_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AMO70359
UniProt:
A0A127MAV3
LinkDB
All DBs
Position
complement(2788376..2791861)
Genome browser
AA seq
1161 aa
AA seq
DB search
MNDSFVHLRVHSEYSLVDGLVRVKELTKRVAKLGMPAVALTDLNNFYALIKFQKAAMAAG
VKPIFGCDLLMRDDDDPDQTTVICLLAQNEKGYRNLTELISRAYQDGQYLGKAYAYRSWI
EQASEGLIALSGGREGDVGQALLAGKADVAQHSLSRWLAVFPDRFYLELQRTGRQNEDDY
IHAAIGLAERNNCPVVATNDVRFLDAGEFEAHDARVCIRDGRVLDDPRRPRNYSDQQYLR
SPEDMAELFADIPEALQNSVEIAKRCNLTIQLGTYYLPEYPIPEGMTQETYFRQLCHDGL
DQRLDFLFDRNSPEFEAHQSEYRDRLEFELNVILQMGFPGYFLIVMDFIQWAKDHDIPVG
PGRGSGAGSLVAYALKITDLDPIQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVINYVA
DNYGRDAVSQIITFGTMAAKAVVRDVARVQGKAYGLADKLSKMIPFEVGITLEKAFEQEE
ILREFLAADEQAQEIWDMATQLEGVVRGVGKHAGGVVIAPSKLTDFAPLYCDDAGGGLVT
QFDKSDVEEAGLVKFDFLGLRTLTIIHWALKIVNAQRAKLGEDPLDIMSIPLQDRPTFEM
LKRAETTAVFQLESRGMKDLIKRLLPDCFEDIIALVALFRPGPLQSGMVDDFINRKHGRA
ELAYPHPQYQHECLKPVLDPTYGIILYQEQVMQIAQVMGGVSLGGADLLRRAMGKKNAAE
MDKQRSLFQTGAVEKGFSEELASNIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKTHYP
APFMAAVMSSELDNTDKIVIFIEECREMKLDYKLPSVNEGEYMFTVNDRGQIVYGLGAIK
GLGEGPVENIIAARNGGGPFKNLFEFCERTDPRKVNKRAIEALIRSGAFDDLGEDRAVLM
AAMPDAVQAAEQAASNAESGMMDLFGGSLAVEDEGGDVYASFKNVRRWTTKERLLGEKET
LGLYVTGHPIDDYEAELRRFVPRKIVDLNPEKHPQTIAGLVMSTRTMKNKRGDTMAFVLL
DDRSARIEVALFSDAYDECREKLIKDTVIVVEGVCSNDEYSGGKKMRVKAVRSIAEARDQ
HARELQLSVSADLVNDDAIARLKGALSVAKGGRCPVVINYQRPEGSGKIRLGDNWRILPN
DELLLRLGEECGANNVVINYD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagctttgtgcatttaagggtgcactcagagtactcgcttgtcgacggcttg
gttcgggttaaagagctgaccaaacgagttgccaaattgggtatgcccgcggtggcgctc
accgatttaaataatttttacgctttaattaagtttcaaaaagcggcgatggcggctggg
gttaaacccatttttggctgcgatttgctgatgcgcgatgacgatgacccagatcagacc
acggttatctgtcttctggcgcaaaatgaaaaaggctaccgcaatcttaccgagctcatt
tctcgcgcgtatcaagatggccagtatttgggcaaggcctatgcgtaccgcagttggatt
gaacaggctagcgagggcttgattgccttgtcaggcggtcgcgagggtgatgttgggcaa
gcactgctcgccgggaaggctgatgttgcgcagcacagcttgtcgcgctggttggcggta
tttcccgaccgtttttatttggagctgcagcgcaccggccgtcaaaacgaagacgattac
atccatgcggcgataggcttagctgagcgcaataactgccctgtggttgccaccaatgat
gttcggtttttggatgccggtgagtttgaagcgcacgatgctcgggtatgtattcgcgat
ggccgggttttggatgatccgcgcaggccacgtaattacagcgaccaacagtatttgcgc
agcccagaagacatggccgagctgtttgctgatattccagaggcgctgcaaaacagtgtg
gaaattgccaagcgctgtaatttgactattcagctaggcacgtattatttgccggaatac
ccaatacctgagggcatgacccaagagacttactttcgtcagctgtgtcatgatggtttg
gatcaacgtctcgattttttgtttgaccgtaattcgccggaatttgaagcgcaccaaagc
gaatatcgcgatcgtctggaatttgaactcaatgttatcttgcagatggggtttcccggc
tatttcctgatcgtaatggactttattcaatgggctaaggatcacgatatacctgttggt
cccggccgtggttctggtgccggttcgctggttgcttatgcgcttaaaattaccgatctt
gaccctattcaatacgatctgctgtttgagcgattcctgaatcctgagcgggtatccatg
cctgactttgatgttgatttttgtatggaaggtcgggatcgggttatcaattatgtggcg
gataattacggacgcgatgcggtaagtcagattattacctttggcaccatggcggccaag
gcggtggtgcgcgacgtcgctcgcgttcaaggcaaggcctatggtctggctgataaactt
tcgaaaatgattccctttgaagtgggcatcacgcttgagaaagcctttgagcaggaagag
attcttagagagtttttagccgcagatgaacaagcccaagaaatttgggatatggccacc
cagctcgaaggtgtggtgcggggcgtgggtaagcacgccggtggtgtagttatcgcgccg
tctaaactcaccgactttgcgccgctatattgtgacgacgcgggtggtggtttggttacc
cagtttgataagagcgatgttgaagaagctgggctagttaagttcgacttcttggggctg
cgtaccctcaccatcattcactgggcattaaaaatcgtgaacgctcagcgtgccaagctg
ggtgaagatcccctcgatattatgtcgattccgctgcaggatcgaccgaccttcgagatg
ctaaagcgcgcagaaaccaccgcggtgttccagttggaatcccgtggtatgaaggatttg
atcaagcggctcctgccagattgctttgaagatattatcgcactggtggccctgtttcgt
ccgggtccattgcagtcgggcatggttgatgactttattaaccgcaagcacggccgcgct
gagttggcctatcctcaccctcagtatcagcacgagtgtttgaagcccgtgctcgaccca
acttacggcattattctgtatcaggagcaggttatgcagatcgcccaggtaatgggtggt
gtaagtcttggtggtgccgacttattgcgccgcgccatgggtaagaaaaatgctgcagaa
atggataagcagcgcagcttgtttcagaccggtgccgtcgaaaagggcttctccgaagag
ctggcctccaatattttcgacttgatggaaaagttcgcaggctacggttttaacaaatcg
cactccgctgcctacgccttggtctcctaccaaactgcctggttgaaaacccattatccc
gcgccttttatggcagcggtaatgagctcggaattagacaataccgacaagatcgttatc
ttcattgaagaatgtcgggaaatgaaactggactataagctgccctcggtaaacgaaggc
gagtatatgttcacggtgaatgatcgcggccaaattgtatacgggcttggtgccatcaaa
ggcttgggtgaaggcccagttgaaaatatcattgctgctcgcaatggcggtgggcctttt
aaaaacctttttgaattttgtgaacgcaccgatccgcgcaaagtgaataagcgcgctata
gaagcgcttattcgctcaggtgcctttgacgatctaggtgaagatcgcgcggtacttatg
gcggctatgcccgatgccgtgcaggctgcagagcaggcggcaagtaatgccgaaagcggc
atgatggatttgtttggcggtagtctcgcggttgaagacgagggcggtgatgtttatgca
agcttcaagaatgtaaggcgctggacaaccaaagagcgtttgctaggcgaaaaagaaaca
cttggcctttatgttaccggacatccgattgatgattacgaggctgaattacgtcgcttt
gtgccaaggaagatagtcgaccttaaccctgagaagcatcctcagaccattgctggcttg
gtgatgagtactcgcaccatgaagaataagcgcggcgatactatggcctttgtgctgctt
gatgaccgcagtgcacgaattgaggttgccttattcagcgatgcctacgatgaatgtcgg
gaaaaactcataaaagacaccgtaattgtggttgagggtgtatgtagcaacgacgagtac
agcggtggcaaaaaaatgcgggtgaaggcggtgcgcagtattgccgaggcgcgggatcag
cacgcccgagagctgcagctgtcggtgagtgcggatttagtaaatgacgacgccattgcc
cgtttaaagggcgcattaagtgttgccaagggcggccgctgcccagtagtgataaattat
cagcgacctgagggtagtggtaaaattcgacttggtgacaattggcgaatcctgccaaat
gatgagttattactgcgcttaggtgaggagtgtggcgcaaataacgtggtcatcaattac
gattaa
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