Zhongshania aliphaticivorans: AZF00_12635
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Entry
AZF00_12635 CDS
T04315
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zal03016
]
AZF00_12635
Enzymes [BR:
zal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AZF00_12635
Transfer RNA biogenesis [BR:
zal03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AZF00_12635
Prokaryotic type
AZF00_12635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AMO69098
UniProt:
A0A127M7B8
LinkDB
All DBs
Position
2838882..2839949
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AA seq
355 aa
AA seq
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MKKYNKLISLLFLFALTGCMPSGLSKLILEKGITARMSANTLAELDDGLHLALCGAGGPM
PAPNASGPCVLVIAGERMFVVDAGTDGVRNIARMGYPINQLEAVFLTHFHSDHIDGLGEM
ATLRWASGANASPLRVYGPEGVDNVVDGFNLSYSQDALYRHAHHGDVVAPMSGAGLMAQG
FSKPAQGELTVLLADEHLTIEALAVNHAPIDPAVAYRFSYKGRTLLISGDTVKSANIEKF
AKNIDLLVHEALAPNLVTMMNEVAHKTGNTVMEHITHDILNYHASPIEAAETARDANVGH
LVYYHIVPPLVIPGQKALYLNGADKIFKNYTIGEDGVAFSLPAGSKKIIQTQHGL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacaataaattaataagcctgctatttcttttcgcacttactggctgcatg
ccctcgggcctgagcaaactgattcttgaaaaaggcatcacagcgcgcatgtcggccaat
accctcgctgaactcgacgacggcctgcatcttgcgctttgcggcgcaggcggaccgatg
ccagcgcccaatgcgtctggcccctgcgtactcgttattgctggcgagcgtatgtttgtt
gttgatgcgggcaccgatggcgttagaaatattgcgcgcatgggctacccgattaaccag
cttgaagcggttttcctcactcactttcactccgatcacatcgacggtttaggtgaaatg
gctacgctgcgctgggcgagcggcgcaaacgcatcgccactgcgcgtttatggccccgaa
ggcgtcgacaatgtcgtcgacggtttcaatctcagctacagccaagatgccctttaccgc
cacgcccaccacggcgacgtcgtcgcgccaatgagcggcgctgggcttatggcgcaaggc
tttagcaaaccagcgcagggtgaacttacggtgcttcttgcagatgagcatttgaccatt
gaagccttggccgttaaccacgccccaattgaccctgcagttgcttaccgctttagctat
aaaggacgcacactgctaattagcggcgacaccgtaaaatcagccaacattgaaaaattt
gcgaagaatatcgacctactggtgcacgaagcgctagcgcccaacttagttaccatgatg
aacgaagtcgcccataagaccggcaataccgttatggagcatataacacatgacatcttg
aattatcacgccagccccatcgaagccgcagaaaccgcccgagatgcgaacgttgggcac
ttagtgtattaccatattgtgccgccactcgtgattcctgggcaaaaagcgctttacctg
aatggcgcagacaaaatatttaaaaattacaccattggcgaagatggtgtggcgttcagt
ctgcccgcaggttctaaaaaaataattcagacgcaacacggactatag
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