Zhongshania aliphaticivorans: AZF00_12995
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Entry
AZF00_12995 CDS
T04315
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AZF00_12995
09124 Replication and repair
03420 Nucleotide excision repair
AZF00_12995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zal03021
]
AZF00_12995
03036 Chromosome and associated proteins [BR:
zal03036
]
AZF00_12995
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_12995
Enzymes [BR:
zal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AZF00_12995
Transcription machinery [BR:
zal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AZF00_12995
Chromosome and associated proteins [BR:
zal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AZF00_12995
DNA repair and recombination proteins [BR:
zal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AZF00_12995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMO70368
UniProt:
A0A127MB21
LinkDB
All DBs
Position
2929481..2931796
Genome browser
AA seq
771 aa
AA seq
DB search
MNVSVRSLCEFAARTGSLEFKYTPAPSAEEGIIGHITVQQRRPDPYVAEYLIKGECEDVF
VSGRVDGYYALQQDCFLEEIKTHRGNVARIGPGRRALHWAQLKVYGALFCRRDNRESINL
RLTYFEVRKEEETHETLEFSADELWNYLSTLCRDYAQWAIKEQRHRERRDLALAALTFPH
ADFRTGQHDLSRNVYMAVASSVPLLLQAPTGIGKTVGVLYPAMKAMPKTGLDRLFFLTCR
NTGRKLGLDGLGTIIKAQAPVDQEAPRGLEAPPIRVLELSSREAACDHPDKACHGDSCPL
AKNFFDRLSDAREEAIQQRFLDQSALRAIARNHSICRYFLAQEMARWSDIVVGDVNHYFD
QFALLHSLTKQNEWKVAPLVDEAHNLIDRARGMYSIVLSEAEMLYTISKAPTPLQKPLAD
LEEAWQTLIKPFLSDTPAADVEHRYFLADVPEELNSALYSLIAAITDYLSDHPTAADIQY
VLFTALGFLRLADAFADHSLCTLEFTVSPLAGTILRGSAKLKIDNLIPADHLKQRFLDAD
SCVLFSATLSPNRYHQDLLGMPATSVFKDIESPFQREQIELRFVTDISTRRGDRFASLEP
ISARIAAQFKAQPGNYLVYLSSFEYLNALCACLNKLQPEIPTIRQSAGMAPSAREQFILD
ASDTTPSVGFAVLGGVFSEGIDLPGDKLIGVFVATLGLPPHDELHEVLRTRLEARYGDGY
RYTYLYPGMQKVIQAAGRLIRTPEDRGVIELIDDRFLREDIKAMLPKWWLH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
ataaatgtgtcggtgagatcactgtgcgaatttgccgcccgcaccggcagcctggagttt
aaatacaccccggcaccaagcgccgaagaaggtattatcggccacattaccgttcagcaa
cgacgccccgatccctacgtagccgagtatctaattaaaggcgagtgcgaagacgtgttt
gtgagcggacgtgtcgacggttactacgcactgcaacaagactgctttctggaagaaata
aagacccatcgcggcaatgtcgccagaattggccctggccgccgcgcactgcactgggca
cagttaaaagtgtatggcgcgctgttttgccggcgcgacaatcgcgagtcaatcaatctt
cgcttgacctattttgaagtgcgcaaagaggaagaaacccacgagacgctagaatttagc
gccgacgagctctggaactacctcagcactttatgccgagactatgctcagtgggcgata
aaagagcagcgccatcgcgagcggcgcgatctcgccctcgccgcgctaactttcccccac
gcggatttccgcacaggccagcacgatctatcgcgcaatgtatatatggcggttgcatct
tcagtgccgctgctcttacaagcccctaccggcatcggtaaaaccgttggggttttatac
cccgcaatgaaggccatgcccaaaaccggcttagaccgcctgttctttttaacctgccgt
aataccgggcgcaaacttgggctcgacggcctgggcaccattattaaagcgcaagctcct
gtcgaccaagaagccccacgcggactcgaagcgccccctattcgcgtacttgagctttcc
tctcgcgaagccgcctgcgaccacccagacaaagcctgccatggcgactcctgcccgctg
gctaaaaacttttttgaccgtttaagcgacgcccgggaagaagccattcagcaacgtttt
ttagatcagtccgcgctccgcgctattgcccgtaaccattctatttgccgctactttctc
gcccaagaaatggcgcgctggagcgatattgtggtcggcgatgtgaaccattactttgat
caattcgcactgctccacagcctgaccaagcaaaacgaatggaaggttgcgccattggtt
gacgaagcccacaacctaatcgaccgcgcccgtggtatgtacagcattgtgctcagcgaa
gcggaaatgctctacaccatcagcaaggcaccaacgccgctgcaaaagccgctggcggat
ctcgaagaagcatggcaaaccctaataaagccttttttaagcgacaccccagcggcagat
gtagaacatcgttacttcttagcagacgtacccgaagagttaaatagcgctttatacagc
ctaattgcggccataaccgactacctaagcgaccaccccactgccgccgacattcagtat
gtgctgtttaccgcgctcggctttctgcgcctcgccgacgcctttgccgatcattcactt
tgcaccttagagtttaccgtgtcgcccctagcgggcaccattttacgcggcagtgccaaa
cttaaaatcgacaacctaattcccgcagaccacttaaagcagcgctttcttgatgccgac
agctgcgtgctattttcggcaacactgtcgccaaaccgctaccaccaagacctcttgggc
atgccagcaaccagcgtcttcaaagacatcgaaagcccctttcagcgcgagcaaattgag
ctgcgttttgtgaccgacatcagcactcgccgcggcgaccgctttgcctcattagaaccc
atcagcgcgcgcatcgccgcccagttcaaggcgcaacccggtaactaccttgtctacctc
agcagcttcgaatacctcaatgcgctgtgcgcgtgtttaaacaaactgcagccagaaatc
cctacaattcgccaaagtgcgggaatggcgccttcggcgcgggaacagtttattttagat
gccagcgacaccactcccagcgttggctttgcagtattaggcggcgtgttttctgaaggt
atcgacctgcccggtgacaaactgattggggtttttgttgccaccttaggcctaccaccc
cacgacgaattgcacgaggtattacgcacgcgattggaagcacgctatggcgacggctac
cgctacacctacctctaccccggcatgcaaaaagtcatacaagcggctggtcgtttaata
cgcacccccgaagatcgcggcgtgattgaactcatcgacgaccgttttctacgtgaggat
atcaaagcgatgctgcccaaatggtggttgcactga
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