Zhongshania aliphaticivorans: AZF00_14290
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Entry
AZF00_14290 CDS
T04315
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AZF00_14290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_14290
Enzymes [BR:
zal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AZF00_14290
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AZF00_14290
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZF00_14290
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZF00_14290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
DUF4224
Motif
Other DBs
NCBI-ProteinID:
AMO69400
UniProt:
A0A127M862
LinkDB
All DBs
Position
complement(3235028..3236467)
Genome browser
AA seq
479 aa
AA seq
DB search
MANQTFYWHDYETWGANPARDRPVQFAGVRTDADLNIIDEPLMVFSRPSPDYLPHPEACL
ITGITPQQALQDGVSEAEFIAIVHAELSQPGTCGVGYNSIRFDDEVTRYTLYRNFFDPYA
REWQNGNSRWDLIDVARLCRALRPEGIEWPVREDGTPSFRLEELSAANGLSHESAHDALS
DVYATIDLAKLLKARQPKLFDYALSLRDKRTVAAMLDTVTQVPVLHVSGRLPASKFCSAL
MMPLALHPDNKNSVIVYDLSVDPQPLIDLSVEEISARVFSATADLPEGAERIPLKEIHIN
RAPIVATAKLLDDAVCERLQLDMAQCRRNWQRIRKSGDLTAKLQKLFGGRKFAESSDPDV
MLYGGGFFSGEDRHLMDSVRSSDPESLAGQSFPFRDQRLPELLWRYRARNYPATLTGAER
QQWLEFCRRRLRQPEPGQLGFAEFRQRLGELALERNSSTDAMILNELSEYADALEQEGL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatcaaaccttctactggcacgattacgaaacctggggcgctaatcccgctcgt
gatcggccggtgcagtttgccggggtgcgcaccgacgcagatttgaatattatcgatgag
cccctaatggtgttcagtcggcccagtccagattatcttccccatcccgaagcctgttta
attaccggtattacgccccagcaagccctgcaagacggtgtgtctgaggcagaatttatt
gctattgttcacgccgagctgtcccagccgggtacctgtggtgttggctataacagtatt
cgtttcgacgatgaagtcactcgctatactttataccgcaacttttttgacccctatgcc
cgagagtggcaaaacggcaattctcgctgggatcttatcgatgtcgcgcgcttgtgtcgg
gccctgcggccagagggtattgaatggccggtgcgggaagatggcaccccaagcttccgc
cttgaggagctgtcagcagccaatggcttaagccacgagtcggcgcacgacgccttatcc
gatgtctacgctaccattgatctggcaaaattacttaaagcccgacagcctaaattattt
gattacgcactgagcttgcgggacaaacgcactgtggcagcgatgctggatacagtcacg
caagtgccggtactgcatgtctccggtcgcctgcctgcgtcgaagttttgctcggcattg
atgatgccgctggccctgcaccccgacaacaaaaacagtgtgattgtgtatgatctcagt
gttgatcctcagcccttaattgatttgtcggtagaagaaatttcggcgcgggtattcagt
gccaccgccgatttgcccgagggcgcagagcgtatccccctcaaagaaattcatatcaat
cgcgctcctattgtcgcgacagcgaaattgctggatgacgccgtatgcgagcgtttacag
ctcgacatggcccagtgtcggcgcaattggcagcgcattcgtaaaagcggtgatcttacg
gccaagctgcaaaaactatttggtggccgcaagttcgccgaaagcagtgatcccgatgtg
atgctctatggcggcggttttttcagtggcgaagatcgtcatttgatggattcggtgcgc
agcagtgacccagagtccttggcggggcagtcttttccctttcgggatcagcgtctgcct
gaattactctggcgttaccgcgcgcgtaattaccctgcgaccttgactggggctgagcgc
cagcagtggctggagttttgccgccgacgcctgcgtcagcccgagccgggtcagctgggt
ttcgctgagtttcgccagcgcttaggtgaattggcgctggagcgcaattcttctacagac
gccatgatactcaatgaattaagcgaatatgccgatgccctggagcaggaaggtttgtga
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