Zhongshania aliphaticivorans: AZF00_16560
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Entry
AZF00_16560 CDS
T04315
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZF00_16560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zal03019
]
AZF00_16560
Messenger RNA biogenesis [BR:
zal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AZF00_16560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AMO69814
UniProt:
A0A127M987
LinkDB
All DBs
Position
complement(3729991..3730509)
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AA seq
172 aa
AA seq
DB search
MIDSDGFRPNVGIVLANEQGQVLWARRVGQSAWQFPQGGIHEGETPEAALYRELYEEVGL
REDDVELLACTRGWLRYRLPQRLIRRENKPLCIGQKQKWFLLQMKTDDAKVSFDCGDKAE
FDHWQWVSYWYPLGQVVAFKREVYRRAMKELAPRHARLVKDSGGDLCAGDLR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgattcggatggatttcgcccaaatgttggtatcgtgctcgctaatgagcagggc
caagttttgtgggcgcgccgtgttggtcagagtgcttggcaatttccgcagggcggtatt
catgagggtgaaacacctgaagcggccctgtatcgtgagctttatgaagaagtcggactg
cgtgaagacgacgttgaattgctcgcctgcacccgtggctggctgcgttaccgtctgcct
cagcgcttgattcggcgcgagaacaagcccctgtgtattggccaaaagcagaaatggttt
ttgctgcaaatgaaaaccgatgatgccaaagtcagtttcgattgcggcgataaggcagag
tttgatcattggcagtgggtgagctattggtacccccttggccaggttgtggcgtttaag
cgtgaggtgtatcggcgggccatgaaagagcttgcgccacgccatgcacgcttagtgaaa
gatagcggcggggatctttgcgcaggtgatttgcgatga
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