Zhongshania aliphaticivorans: AZF00_16990
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Entry
AZF00_16990 CDS
T04315
Name
(GenBank) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zal03016
]
AZF00_16990
Enzymes [BR:
zal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AZF00_16990
Transfer RNA biogenesis [BR:
zal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AZF00_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
Motif
Other DBs
NCBI-ProteinID:
AMO69892
UniProt:
A0A127M9H2
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All DBs
Position
3815546..3817435
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AA seq
629 aa
AA seq
DB search
MLDKNALQQLRQLKTHIVETKDQGEGEVRGSQRRFGFVRLDDNRDVFLAPDDMQRVFPGD
RVKITVHTDDKGKFKAELEKLIDSPLDCFTGRYVVRGQGHFVEPDLPRFNKLLFIPPSQR
KKCAEGDLLYCQVAQHPFKDGKSQVKVLENIGSPDQPGIEGKYTQRKFKLPRDWPASCGI
TEDKYLDGREDLRDLPFVTIDSAETRDLDDALWAQSNAQGWLLKVAVADPGAVIAPGSPT
DIAAKQRASSVYLPGFTQPMIPNSISQGACSLLADEDRAAIVCTLQVGIDGDISDIQFSE
ALIRSHAKLSYTDVHAHIHGKMDLGYPALNELYAASQALNRYRREHHIVMPEQADFHFQL
NEHRKIEAIIKVERNDAHRLVEECMLAANRSVAEWLGDAPALFVSHAGLREDRLDNVRKV
IAKELPELIDCDISSLEGYKALIKACDASESSLPLRSIFARMLQPGSISAEPKPHFGLGL
ERYSTFTSPLRKYSDLIVQRCIRAKLRGESIQRPDEETATSLQEALRNGRQASNQMEQWL
QYQYLATNTSDTVYPARIAHVNGGGFTVELVDYGISGFVEARTITEKLSFDADTLRLHSA
HSNYQLEQIVNVKVSELDDFQRKLMFILA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaaaaatgccctgcagcaactccgccaactcaaaactcatattgttgaaacc
aaagaccaaggtgagggcgaagttcgcggcagtcaacgccgcttcggttttgttcgcctc
gacgacaaccgcgatgtatttctggcgccagacgatatgcagcgggtatttcccggtgat
cgcgtaaagattacggtgcacaccgacgacaagggcaaatttaaagccgagctggaaaaa
ctgatcgacagcccactggactgtttcaccggtcgttatgtggtgcggggccagggccat
tttgtagaacccgacttgccgcgctttaacaaattgctgtttattccgccttcacagcgg
aaaaaatgcgccgaaggcgatctcctgtactgccaagtggcacagcacccctttaaagac
ggcaaatcccaagtaaaggtacttgaaaatatcggcagtcccgatcaacccggtatcgaa
ggcaaatacactcagcgcaaattcaaactgcctagagactggcccgcgagctgcggtata
accgaagataagtacttagacggccgcgaagatctgcgggatttaccgtttgtcaccatc
gactcggcagaaacccgtgacctagacgacgcgctatgggctcaaagcaatgcgcaaggc
tggttgctaaaagttgccgttgccgatcctggcgcggtaatagcgccgggcagcccgact
gatatcgccgccaaacaacgcgccagcagcgtttacctgccaggctttacccagccgatg
atacccaatagcatttcgcagggcgcctgctcactgctcgctgacgaagatcgcgccgcg
attgtctgcaccctgcaggttggtattgatggcgatattagtgacattcaatttagcgag
gcgctgatccgttcccacgccaagctaagttacaccgatgtacacgcccatattcacggc
aaaatggatttaggctacccagcactaaacgagctttacgccgccagccaagccttaaac
cgctatcgccgcgaacatcacattgtgatgccagaacaagcagacttccattttcagctc
aacgagcaccgtaaaatcgaagccattattaaagttgagcgcaacgacgcccaccgattg
gtggaggagtgcatgcttgccgctaaccgcagtgtggcggaatggttaggcgacgcccca
gcactgttcgtaagccacgcgggtttgcgtgaagaccgtctcgacaatgtacgcaaagtg
atcgccaaagaattacctgagctgattgattgcgacataagcagcctagagggttataaa
gccctcattaaagcctgtgacgcgagcgaatccagcctcccactgcgcagtatatttgcc
cgcatgcttcagcccggcagcattagtgctgagccaaagccccatttcggccttggccta
gaacgctacagcacgtttacctcgccactgcgcaaatacagcgaccttatagtacagcgc
tgtattcgcgccaagcttcgcggcgaaagcattcagcgcccagatgaagaaaccgcaacg
agcttacaagaagccctgcgcaacggccgtcaagccagcaatcagatggagcagtggctg
caataccagtaccttgccacgaacactagcgacacggtttacccggcccgcattgcccac
gtcaatggcggtggtttcaccgtagaattggtagattacggtattagcggctttgttgag
gcccgcaccattaccgaaaaattaagcttcgacgccgacaccctgcgcctgcacagtgcc
cacagcaattatcagctagagcagatcgtgaatgtaaaggtatctgagctcgatgatttt
cagcgtaagttgatgtttatcctggcctga
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