Zhongshania aliphaticivorans: AZF00_18100
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Entry
AZF00_18100 CDS
T04315
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zal
Zhongshania aliphaticivorans
Pathway
zal03420
Nucleotide excision repair
zal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZF00_18100 (uvrD)
03430 Mismatch repair
AZF00_18100 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zal03400
]
AZF00_18100 (uvrD)
Enzymes [BR:
zal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZF00_18100 (uvrD)
DNA repair and recombination proteins [BR:
zal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZF00_18100 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AZF00_18100 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AMO70098
UniProt:
A0A127MAA1
LinkDB
All DBs
Position
4043603..4045777
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSYILDELNDAQRDAVTADSTGTLVLAGAGSGKTRVLVHRIAWKIKVEGLSTHSIMAV
TFTNKAAKEMRGRIENLLGSSLNHGMWVGTFHGLAHRLLKAHAQEAGLPNNFQILDSDDQ
LRQLKRIHRELALDDSRWPPRQSQYFINGHKDEGRRAAHIDDFGGDLYLTTMLKVYRRYE
EICRQQGVIDFAELLLRALELWRDNPAILDHYQQRFKHVLVDEFQDTNAVQYAWLRLLAS
KGMAMTAVGDDDQSIYGWRGARIENIQQFSKDIENTHVVRLEQNYRSTATILKAANALIA
NNSQRLGKELWTEDGDGDKISLFAAFNEQDEARFLTDRIAELVRDDYRRSDIGVLYRSNA
QSRILEEYLIRAGLPYRIYGGQRFYDRLEIKNALAYMRIVELRDDDTAIERVINTPTRGI
GTRTVEILREYAREHQTSLWRAALAIIENGLLPARAGNALRGFLALIEDLAEQCRDKPLD
EQINIAIDRSGLLAFHEKEKGEKGQARVENLHELITAAAAFEPEDEDIEPLRAFLDRAAL
DAGDQQADEHEDSVQLMTLHSAKGLEFPAVFIVGVEENLFPHKMSMEDPERLEEERRLAY
VGITRAEQKLFLSYAESRRLHGQESFNSLSRFIREIPNELIDEVRINNTVSRPSSYAQSG
ATTAQQASAAAMGIALGQHVLHSIFGAGVVLSFEGQGASARVQVNFEDEGSKWLVLQYAN
LQIL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttatattcttgacgaactcaatgacgcacagcgcgacgcggtcaccgcc
gacagcacaggcaccttagtacttgccggagctggcagcggtaaaacccgggtgctggtt
caccgtattgcctggaaaatcaaggtagaggggctgtcgacccacagcattatggcggtg
acctttaccaataaggccgccaaggagatgcgcgggcgcatcgaaaacttgctaggtagc
agtttaaatcacggtatgtgggtgggcacctttcacggtttggctcatcgcctgctcaag
gcccacgcccaagaagctgggctacccaataatttccaaattttggacagcgacgaccaa
ctccgccagctcaagcgtatccatcgcgagctagcgctcgacgatagccgctggccgccc
cggcagtctcagtattttataaatggtcacaaagatgaaggccgccgcgctgcccacatc
gacgattttggcggcgatctttacctgaccaccatgctcaaggtttaccgccgctacgag
gagatctgtcgccagcaaggggtaatcgactttgccgaactgctgctgcgcgcactggag
ctgtggcgcgacaatccagcgattctcgaccattatcagcaacgctttaagcacgttttg
gttgacgagtttcaagacaccaatgccgtgcaatacgcttggctgcgcttgctagccagc
aagggcatggcgatgaccgcagtgggcgatgacgaccagtctatttacggctggcgcggc
gcccgcattgagaatattcaacagttctcaaaagacattgaaaacacccatgtggtgcgc
ctagagcaaaactatcgctccaccgccaccatcctcaaagccgccaatgcgctgatcgcc
aataacagccagcgcctcggtaaagaactgtggaccgaagacggcgacggcgacaaaatc
tcgctgtttgccgcctttaacgaacaagatgaagcgcgctttctcaccgaccgcattgcc
gagctggtccgcgacgattaccgccgcagcgatattggcgtgctataccgcagcaatgcc
cagtcgcgaatactggaagaatatctgattcgcgccggtctgccctaccgcatctacggc
ggtcagcgcttttacgaccgcctagaaattaaaaacgcgctggcctatatgcgcattgtt
gaactgcgcgacgacgacaccgccatcgagcgggtgattaacactcccacccgtggcatt
ggcacccgcaccgtagaaattctgcgcgaatacgcccgcgagcatcaaacctcgttgtgg
cgtgccgcactggccatcatcgaaaatggcctgctccccgctcgtgctggtaacgccctg
cgcggctttttagcactgattgaggatttagccgagcaatgtcgggataaacccctcgat
gagcagatcaacatcgccattgatcgttcggggctactggcctttcacgaaaaagaaaaa
ggtgaaaagggtcaggcccgggtcgaaaacttacacgagctgattacggccgccgccgcc
tttgaaccggaagacgaagacatcgaacccctgcgcgcctttctcgaccgcgccgcgctg
gacgccggagaccagcaggccgacgaacacgaagacagcgtgcagttaatgactttgcac
tcggccaagggtttggaatttccggcggtgtttattgtgggcgtggaagaaaacctcttt
ccccacaaaatgtcgatggaagatcccgagcgtttggaagaagaacgtcgcctcgcctat
gtcggtataacccgcgccgagcaaaagctgttcttaagctacgcggagtctcgtcgtctg
cacggccaagaaagctttaatagcttgtcacgttttatccgcgaaatacccaatgaactc
attgacgaagtgcgcattaataataccgttagtcggccaagtagttacgctcaaagcggc
gcaaccacggcgcaacaagcctcggcagcggcaatgggcattgccttgggtcaacacgtt
ttacacagcatttttggcgcaggcgtagtactcagttttgaaggccagggcgctagcgcc
cgcgtgcaagttaatttcgaagacgaaggcagtaaatggctggtactgcaatacgccaat
cttcaaattttgtaa
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