Zalophus californianus (California sea lion): 113907882
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Entry
113907882 CDS
T07874
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113907882 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113907882 (EXOSC10)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
113907882 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
113907882
NCBI-ProteinID:
XP_027423396
UniProt:
A0A6J2AX84
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Position
4:complement(8150837..8171448)
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AA seq
887 aa
AA seq
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MAPPSPREPKAPTATSAAKPDGEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKSETFRLLHAKNI
VRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVGETPCHFVSSLDELVEL
SEKLLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPVQLQVVWQRGRDICLKK
FVKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVATSVKKSGPLPGPE
RLENVLFGPHDCSHASSDGYPVIPNNGPVPVQKQASLFPDQREEEALPDTRCLIATAVIT
LFNEPSAEESRKSPLTVAQKKAQNIMESFENPFKMFLPSLEHRAHISQAAKFDPSSKIYE
ISNRWKLASQVQVHKESKETAKGKAAEQTAARDQVKEEYKATAEQAVSVRQQAALESAAK
KRERTTSDPRTTEQKQEKKRLKTSKKPKDPDPPEKDFTPYDYSKSDFKAFAGDRKPKPSS
QFDPNQQTQPSKKCVAPKKLKQLVGNKSMSFPTGKSDRGFRHSWPKR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtccccgagagcccaaggccccgactgccacgagcgcggccaagccc
gacggggagatggtgctgccgggcttcccggacgcagacagcttcgtaaagtttgctctt
gggtcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggcgatgagtat
gatttctaccgaagttttcctggcttccaggcattttgtgaaacacagggagacagattg
cttcagtgcatgagtagggtaatgcagtaccatgggtgtcgaagcaacattaaggaccga
agtaaagtgaccgagttggaggacaagtttgatttactagttgataccaatgatgtcatt
ctggaaagagtgggtattttactggatgaagcatcaggtgtgaataagaatcaacagcct
gtcctcccagcaggattgcaggttcccaaaacaatagtgtccagctggaaccgtaaggca
ggagaatatagcaaaaaaacaaaatctgaaactttccggttgcttcatgcaaaaaacatc
gtccggcctcagcttaaattccgagaaaagatcgacaactccaacactccatttcttccc
aagatcttcatcaagcccaatgctcagaaacccctccctcaggcactctctaaagaaagg
agggagcgcccccaggatcgtccggaggacctggatgtgccccctgccctggcggatttc
atccatcagcagagaacccagcaggtggagcaggacatgtttgcacatccttatcagtat
gaactagatcacttcactccaccagattcagtccttcaaaagccacaaccccagttatat
aggccggtgggggagaccccctgccattttgtgtcttccctggacgagctggtggagctc
agtgaaaagctcttgacttgtcaagaattcgcggtggacttagagcaccactcgtaccgg
agcttcctggggctgacctgcctgatgcaaatctccacccgaacagaagacttcatcgtg
gacacgctggagcttcgaagtgacatgtacattctcaatgagagcctcacagaccctgcc
atcgttaaggtcttccacggtgctgactcagacatcgaatggctacagaaagacttcggc
ttgtacgtagtgaacatgtttgatacccatcaggcagcacgcctccttaacctgggccgg
cactccctggaccacctcctgaaactctactgcagtgtggaatcgaacaagcagtatcag
ctggccgactggagaatacgacctctgcccgaggaaatgctcaactacgcccgggatgac
acccattacctgctttacatttatgataaaatgaggctggagctgtgggagcgaggcaac
gagcagcctgtgcaactgcaggtggtgtggcaacgcggcagggacatctgcctcaagaaa
ttcgtcaagcccatcttcacagacgagtcctaccttgaactgtacaggaagcagaaaaag
catctcaacacacagcagctgacagcctttcagctgctgttcgcttggagggataaaaca
gctcgtagggaagatgaaagttatggatatgtactgccaaaccacatgatgctgaagata
gctgaagaactgcccaaggaacctcagggcatcatagcttgctgtaaccctgtaccacct
cttgtacggcagcagatcaatgagatgcatctcttaatccagcaggctcgggagatgccc
ctgctcaagtctgaagttgcaaccagcgtgaagaagagcggcccgctgcctggtcctgag
agattggagaatgtgctttttggaccccatgactgctcccacgcctcttcagatggctac
cctgtcatcccaaacaacgggcctgtgccagtgcagaaacaagcaagcctcttccccgac
caaagagaagaagaagccctgccagataccagatgccttattgccactgctgtcatcacg
ctatttaacgaacctagtgccgaagaaagtagaaagagcccattaacagttgcacagaag
aaagcccagaacataatggagtccttcgaaaatccatttaagatgttcctgccttcactc
gaacaccgcgctcacatttctcaggcagcaaagtttgatccatcgtcaaaaatctacgaa
atcagcaaccgctggaagctggcaagccaggtgcaggtgcacaaggaatctaaagaaact
gccaaggggaaggcagcagagcaaacagctgctcgggaccaggtcaaggaagagtacaaa
gcgacagcggaacaggccgtgtctgtccgacagcaggctgccctggaaagtgccgccaag
aagagagagcgaaccacaagtgacccgaggaccacagagcagaaacaagaaaagaagcga
ctcaaaacttccaagaagccaaaagacccagatccgccagaaaaggatttcaccccttat
gactacagcaagtcggatttcaaggcttttgccggagacaggaaaccaaaaccttcttcc
cagtttgatccaaatcagcagacccagcccagcaagaaatgcgttgcacccaaaaaactg
aaacagttggtgggaaacaaaagtatgtcctttccaaccggaaagtcagacaggggtttc
aggcacagctggccaaagagatag
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