Zalophus californianus (California sea lion): 113907891
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Entry
113907891 CDS
T07874
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113907891 (CASC3)
03015 mRNA surveillance pathway
113907891 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113907891 (CASC3)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113907891 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
113907891
NCBI-ProteinID:
XP_027423416
UniProt:
A0A6J2AXA7
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All DBs
Position
16:39422534..39440905
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AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIIERPNKSHRHQGPGGTVPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRCGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaagagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagtggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaggaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggagatggacaggagagcacagaacctgtggagaac
aaagtggggaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagcc
tacataccccggaaagggctcttctttgagcatgatcttcgagggcagacacaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattattgagcggccaaacaag
tcccatcgccaccagggtcctgggggcaccgtaccaccacggacatttatcaacaggaat
gctgcagggactggccgaatgtctgctcccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaggctggtgggcagcacggtggccgttgtggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgagg
gacccatctccagaagctgatgctcaagtgctcggcagtcctgagaaggaggaggcggcc
tcagagataccagctgctgctcccgacactgcaccaccggcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccagggcag
ccttcgttcctgcaaccacgtgagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccgggcctctat
cccccaccagtgtccatgtctccaggccagccaccacctcagcagttgcttgcccctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcactgcctcccccaccgccgcctcatctgtatcctaatacgcaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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