Zalophus californianus (California sea lion): 113907937
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Entry
113907937 CDS
T07874
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04080
Neuroactive ligand-receptor interaction
zca04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113907937 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
113907937 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113907937 (TRPV1)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113907937 (TRPV1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
113907937
NCBI-ProteinID:
XP_027423523
UniProt:
A0A6J2B0U1
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Position
16:13730761..13757255
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AA seq
841 aa
AA seq
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MKKWRSSDSGESEDPPQEDSCPEPLDGDPNSRPAPAKPQFFTTAKSRSRLFGKCDSEEAS
PMDCSYEEGQPASCPAITVSPVVIIQKHEDGPTCARQPSQDSVTAAPEKSLKLYDRRKIF
EAVAQNNCEELQSLLLFLQRSKKHLMDSEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLE
IAQQTDSLKELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKK
TKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT
VDNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQREIQ
EPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPL
NRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTAAYYRPVDGLPPYKLKHTVGDYFRVTGE
ILSVSGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHHKEYV
ASMVFSLAMGWTNMLYYTRGFQQMGIYSVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTL
IEDGKNNSVPAESTLHRWRGPGCRSPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKA
VFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR
KAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSL
RSGRVSGRNWKNFALVPLLRDASTRERHSAQPEEVHLRHFAGSLKPEDAEVFKDPVALGE
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggaggagctcagattcaggggagtctgaggacccaccccaagaggactcc
tgcccagagcccctggatggagaccctaattccaggccagctccagccaagccccaattc
ttcaccacggctaagagccgtagccggcttttcgggaagtgcgactcagaggaggcttct
cctatggattgctcttatgaagaaggccagccagcctcctgcccagccatcacagtcagc
cctgttgtcatcatccagaagcatgaggatggccccacctgtgccaggcagccatcccag
gattctgtcactgctgcacctgagaagagcctcaagctctatgatcgcaggaagatcttt
gaagcggtcgctcagaataactgtgaggagctgcagagcctgctgctcttcctgcagagg
agcaagaagcacctcatggacagcgagttcaaagacccagagacagggaagacctgtctg
ctgaaagccatgctcaacctgcacgatgggcagaatgacaccatccccctgctcctggag
attgcccagcagacggacagcctgaaggagttagtcaacgccagctacacagacagttac
tacaagggccagacggccctgcacattgccattgagaggcggaacatggcactagtcacc
ctcctggtggagaacggggcagacgtccaggctgcagccaacggggacttctttaagaaa
accaaggggcggcctggattctactttggtgagcttcccctctccttggctgcatgcacc
aaccagctgggcattgtgaagttcctgctgcagaactcttggcagccagcagacatcagc
gccagggactccgtgggcaacacggtgctgcacgcactggtggaagtggccgacaacaca
gtggacaacaccaaatttgtgacgagcatgtacaacgagattctgatcctaggggccaag
ctccaccctacactgaagctggaggagctcaccaacaagaaggggctgaccccactggct
ctggccgcccggagtgggaaaattggggtcttggcctatattctccagagggagatccag
gagcctgagtgcaggcatctgtccaggaagttcaccgaatgggcgtacgggcccgtgcac
tcctcgctctacgacctgtcctgcattgacacttgtgagaagaactcggtgctggaggtg
atcgcctacagcagcagtgagacccccaatcgccacgacatgcttttggtggaacctctg
aaccgactcctgcaggacaaatgggacagatttgtcaagcgcatcttctacttcaacttc
tttgtctactgcttgtatatgatcatcttcaccacggcagcctactacaggcctgtggat
ggcttgcctccctataagctgaaacacaccgttggggactatttccgagtcactggcgag
attctttctgtatcagggggagtctacttttttttccgcgggattcaatatttcctgcag
aggcggccgtcactgaagaccttgtttgtggacagctacagtgagatgcttttttttgtg
cagtcactgttcatgctggggaccgtggtgctgtacttctgccaccacaaggagtacgtg
gcctccatggtgttctccctggccatgggctggaccaacatgctctactacacccgcggc
ttccagcagatgggcatctattctgttatgattgagaagatgatcctgagagacctgtgt
cgcttcatgtttgtctaccttgttttcttgttcgggttttccacagcggtggtgacgctg
attgaggatgggaagaataactctgtgccggctgagtccacattgcacaggtggcgaggg
cctggctgccggtcacctgacagctcctacaacagcctgtactccacgtgtctggagctg
ttcaagttcaccattggtatgggcgacctggagttcaccgagaactatgacttcaaggct
gtcttcatcatcttgttgctggcctacgtgattctcacctatatccttctgctcaacatg
ctcattgccctcatgggtgagactgtcaacaagatcgcgcaggagagcaagaacatctgg
aagctacagagagctatcaccatcctggacacggagaagagcttccttaagtgtatgagg
aaggccttccgctcaggcaagctgttgcaagtggggtacacacctgatggcaaggatgac
tacaggtggtgtttcagggtggatgaggtcaactggaccacctggaacaccaatgtaggt
atcatcaatgaagacccgggcaactgtgagggcatcaagcgcaccctgagcttctccctg
cggtcaggcagagtttcaggaagaaactggaagaactttgccctggttccccttttaaga
gatgcaagtacaagagaaaggcactctgcccagccagaggaagttcatctgaggcacttt
gcagggtccctcaagccagaagatgctgaggtcttcaaggatcctgttgctttaggggag
aagtga
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