Zalophus californianus (California sea lion): 113908024
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Entry
113908024 CDS
T07874
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00260
Glycine, serine and threonine metabolism
zca00630
Glyoxylate and dicarboxylate metabolism
zca00670
One carbon pool by folate
zca01100
Metabolic pathways
zca01200
Carbon metabolism
zca01230
Biosynthesis of amino acids
zca01240
Biosynthesis of cofactors
zca01523
Antifolate resistance
zca04981
Folate transport and metabolism
Module
zca_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
113908024 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
113908024 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
113908024 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
113908024 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
113908024 (SHMT1)
Enzymes [BR:
zca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
113908024 (SHMT1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
113908024
NCBI-ProteinID:
XP_027423695
UniProt:
A0A6J2AVQ6
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Position
16:11568525..11592911
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AA seq
484 aa
AA seq
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MMTQVNGAHKDADLWSSHDKMLAQPLKDGDTEVYNIIKKESNRQRVGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEILCQKRALQVYGLDPKCWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGV
VPSPFEHCHVVSTTTHKTLRGCRAGMIFYRRGVCSVDPKTGKETLYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFRLYQRQVVANCRVLAETLMELGYKVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQK
VAQFIHRGIELTLQIQNDVGARATLKEFREKLAGDEKHQRAVRALREEVESFASLFPLPG
LPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcaagtcaacggggctcacaaggatgctgacctgtggtcgtcgcatgataaa
atgctggcacaacccctgaaagacggtgacactgaggtttacaacatcatcaagaaggag
agtaaccggcagagggttgggctggagctgatcgcgtcagagaatttcgccagccgagca
gttttggaggctctgggctcttgcttaaataacaagtactccgaggggtacccaggccag
aggtattatggcgggaccgagttcatcgacgagctggagatcctctgtcaaaagcgagcg
ctgcaggtctatggtctggaccccaagtgctggggggtcaatgtccagccctactcaggc
tcccctgccaacttcgcggtgtacaccgccctggtggagccccacgggcgcatcatgggc
ctggacctgcccgatggcggccacctgacccatgggttcatgacagacaagaagaaaatc
tctgccacatccatcttttttgaatctatgccctataaggtgaacccagacactggctac
atcaactacgaccaactggaggaaaatgcccgcctcttccacccgaagctgattatcgca
ggaaccagctgctactcccgaaacctggactacgctcgactgaggaagatcgcggacgac
aacggggcgtatctcatggccgacatggcgcacatcagcgggctggtggcggctggcgtg
gtgccctccccctttgagcactgccacgtggtgtccaccaccacccacaaaaccctgaga
ggctgccgagccggcatgatcttctacaggagaggagtgtgcagcgtggatcccaagacg
ggcaaagagactctgtacaacctggagtcgcttatcaactcggccgtgttcccaggcctg
cagggcggcccccacaaccacgccattgctggggtcgctgtggccctgaagcaagcgatg
actccggaattcagactttaccagcgccaggtggtggccaactgccgggttctggctgag
accctgatggagctgggctacaaagtggtgacaggtggttctgacaaccatttgatcctc
gtggatctccgttccaaaggcacggacggtggaagggctgagaaagttctagaagcctgt
tctattgcctgtaataagaacacctgtccaggtgacaaaagcgcgctgcggcccagcgga
ctgcgtctggggactccagccctgacatcccgaggacttttggaaaaagagttccagaaa
gtagcccagtttattcacagagggatagaactgactctgcagattcagaatgacgttggg
gccagggccaccctgaaggagttcagagagaaactggcaggggacgagaagcaccaaagg
gccgtccgggctctcagggaggaggtggagagcttcgcatctctcttccctctgcctggc
ctgcctgacttctag
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