Zalophus californianus (California sea lion): 113908211
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Entry
113908211 CDS
T07874
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04136
Autophagy - other
zca04140
Autophagy - animal
zca05010
Alzheimer disease
zca05014
Amyotrophic lateral sclerosis
zca05016
Huntington disease
zca05017
Spinocerebellar ataxia
zca05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113908211 (WIPI1)
04136 Autophagy - other
113908211 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
113908211 (WIPI1)
05014 Amyotrophic lateral sclerosis
113908211 (WIPI1)
05016 Huntington disease
113908211 (WIPI1)
05017 Spinocerebellar ataxia
113908211 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
113908211 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113908211 (WIPI1)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113908211 (WIPI1)
Membrane trafficking [BR:
zca04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
113908211 (WIPI1)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113908211 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
DUF5711
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
113908211
NCBI-ProteinID:
XP_027424188
UniProt:
A0A6J2B2U9
LinkDB
All DBs
Position
16:complement(50835970..50867897)
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADGPPGGLEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSTEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNVLSIRLNRQRLLVCLEEA
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTNSRPEEPSTWTGYMGKMFMAASNYLPTQVSDMMNQ
DRAFATGRLNFSGQRNICALSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPSLPQSYAATVARPSTSSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggcggcggatggccccccgggcgggctcgaggcggcgctcagctgcttc
tctttcaaccaggactgcacatccctagcaattggaaccaaagccggttataagctgttt
tctttgagttctgtggagcaactggaccaagtccatggaagcaccgagatcccggatgtc
tacatcgtggagcgccttttctccagcagcctggtagtggtggtcagtcacacgaagcca
cggcagatgaacgtctatcacttcaagaaaggcacggagatctgtaattacagctactcc
agcaacgtcttgtccataaggctgaaccggcagaggctgctggtgtgcctggaggaggcc
atttacatacacaacatcaaagacatgaagctgctgaaaactatcctggatattcctgca
aacccaacaggtctgtgtgccctctcaatcaaccattccaattcgtatgtggcctatcct
ggaagcctgactacaggcgagatcgtgctttacgatggacactccctgaaaacagtctgc
acgattgctgcccacgaggggacgctggcagccatcaccttcaatgcctcgggctccaaa
ctagcgagcgcttctgaaaaaggcaccgtcatccgggtgttctctgtacctgacgggcaa
aagctctacgagtttcgcagaggcatgaaaaggtacgtgacaatcagctcgctcgtgttc
agcatggactcacagttcctctgtgcctcaagcaacaccgagaccgtgcacatcttcaag
ctggagcacctcacgaacagccgaccagaagagccttcgacctggactggctacatggga
aaaatgttcatggctgcttccaactacctccccacccaggtgtcagacatgatgaaccag
gacagggccttcgccaccggacgtttgaatttctctgggcagaggaacatctgcgccctc
tccacgatccagaaactgccgaggctgctggtcgcatcatccgatgggcacctttacatc
tacaatttggaccctcaggacggaggagaatgtgtcttaatcaagacccacagcttgctc
agctcaggaacaacagaagaaaataaagaaaatgacctcagaccttcattacctcagtct
tacgcagcaactgtagccagaccgagcacctcatccgcctccacggtgccaggttattct
gaggacggcggagccctccgaggagaggttattcctgaacatgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgaattcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcatga
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