Zalophus californianus (California sea lion): 113908283
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Entry
113908283 CDS
T07874
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04082
Neuroactive ligand signaling
zca04721
Synaptic vesicle cycle
zca04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113908283 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
113908283 (SLC6A4)
04721 Synaptic vesicle cycle
113908283 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113908283 (SLC6A4)
Transporters [BR:
zca02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113908283 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
113908283
NCBI-ProteinID:
XP_027424330
UniProt:
A0A6J2AXF2
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Position
16:16822844..16858646
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AA seq
630 aa
AA seq
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METTPLNSQKELSACKDKEDCQENGVLQKGVPVPEDKVESDHISNGYSAVPSPGAGDDSQ
HSIPAATTALVAEAHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGVSWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWEKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWTKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctatcggcgtgtaaggataaagaagat
tgtcaggaaaatggagttctgcagaagggtgtccctgtccctgaggataaagtggagtct
gaccacatctccaacgggtactcagcagtgccgagccctggtgccggagatgactctcag
cactccattccggccgccaccaccgccctagtggctgaggctcatcaaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggttatgccgtggacctgggc
aacgtctggcgctttccctacatctgttaccagaacggagggggggcattcctcctgccc
tacacgatcatggccatttttggggggatcccactgttctacatggagctcgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaaggg
atcggttacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
acgaactcctggaacactggcaactgcacaaactacttctccgggaacaacgtcacctgg
acgctgcactccacgtcccccgcagaagaattttacacgcgccacgtcctgcagatccat
cggtctaagggacttcaggacctggggggggtcagctggcagctcaccctctgcatcatg
ctgatcttcactgttatctacttcagtatctggaagggtgtcaaaacgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctctcggtcctgctggtaaggggagcc
accctccctggagcctggaggggtgttctcttttatttgaaacccaactgggagaaactc
ctggagacaggggtatgggtagatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctcttggctttcgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgaggaacgaggatgtgtccgaggtggccaaagac
gcaggccccagcctcctcttcatcacgtatgcagaggccatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctcatgttaatcacactgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccgcacatctggaccaag
cgccgggagtggtttgtgcttggtgtggtcattacctgcttctttggatccctggccacc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacggggcccgcg
gtgctcaccgttgcgcttatagaggcggttgctgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtagccatcagccctctctttctcctgttcatcatttgcagttttttaatgagcccg
ccacagctccgacttttccagtataactatcctcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatatagcttaccggctgatcatcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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