Zalophus californianus (California sea lion): 113908556
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Entry
113908556 CDS
T07874
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04066
HIF-1 signaling pathway
zca04137
Mitophagy - animal
zca04140
Autophagy - animal
zca04148
Efferocytosis
zca04659
Th17 cell differentiation
zca04919
Thyroid hormone signaling pathway
zca05167
Kaposi sarcoma-associated herpesvirus infection
zca05200
Pathways in cancer
zca05205
Proteoglycans in cancer
zca05208
Chemical carcinogenesis - reactive oxygen species
zca05211
Renal cell carcinoma
zca05230
Central carbon metabolism in cancer
zca05231
Choline metabolism in cancer
zca05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
113908556 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113908556 (HIF1A)
04137 Mitophagy - animal
113908556 (HIF1A)
04148 Efferocytosis
113908556 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
113908556 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
113908556 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113908556 (HIF1A)
05205 Proteoglycans in cancer
113908556 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
113908556 (HIF1A)
05230 Central carbon metabolism in cancer
113908556 (HIF1A)
05231 Choline metabolism in cancer
113908556 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
113908556 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
113908556 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
113908556 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113908556 (HIF1A)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113908556 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
113908556
NCBI-ProteinID:
XP_027424584
UniProt:
A0A6J2AYG6
LinkDB
All DBs
Position
6:complement(38164809..38207497)
Genome browser
AA seq
822 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEVPLYNDVMLPSSNDKLQSINLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSTNPQSASTVTVFQ
PTQIQEPPVTTTSTTTTDELKTVTKDGIEDIKILIASPSPTHVPKVTASATTSPYSDTGS
RTASPNRAGKGVIEQTEKSHPRSPNVLSVTLSQRTTIPEEELNPKILALQNAQRKRKIEQ
DGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEHSGMEQKTIILIPSDLACRLLG
QSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaagataagttctgaacgtagaaaagaa
aagtctagagatgcagctagatctcggagaagtaaagagtccgaagttttttatgagctt
gctcatcagttgccacttccccataatgtgagctcgcatcttgataaggcttctgttatg
aggcttaccatcagctatttgcgtgtaaggaaacttctggatgctggtgatttagatatt
gaagatgaaatgaaggcacagatgaattgcttttatttgaaagccctagatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataatgtgaataaatacatg
ggattgactcagtttgaactaactggacacagtgtgtttgattttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccttgtgaaaaagggtaaagag
cagaatacacagcgaagcttttttctcagaatgaagtgtaccctaactagccgggggaga
actatgaacataaagtcagcaacatggaaagtacttcactgcacaggccatattcatgtc
tacgataccaacagtaaccaatctcagtgtgggtataagaaaccacccatgacgtgcttg
gtgctaatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagcaag
acttttctcagtcgtcacagtctggatatgaaattttcttactgtgatgaaagaattact
gaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatattatcat
gctttggactctgaccatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaactcaa
gcaactgtcatatataacactaagaactctcaaccacagtgcattgtatgtgtaaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
ctcaaaccagttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagtagtctctttgataaacttaagaaggaacctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagatttcggcagcaatgacacagaaact
gatgaccaacaacttgaggaggttccgttgtataatgatgtaatgctcccctcatccaac
gacaaattacagagtataaatttggcaatgtctcccttacctgcttctgaaactccaaag
ccacttcgaagtagtgctgatcctgcactcaatcaagaagttgcattaaaattagagcca
aatccagagtccctggaactttcttttactatgccccagattcaagatcagccagctagt
ccttctgatggaagcactagacaaagttcacctgagcctaacagtcccagtgaatattgt
tttgatgtggatagtgatatggtcaatgaatttaagctggaattagtagagaaacttttt
gctgaagacacagaagcaaagaatccattttccacccaggacactgatttagacttggag
atgttagctccttatatcccaatggatgatgacttccagttacgttccttcgatcagttg
tcaccgctggaaagcagttctacgaaccctcaaagtgcgagcacagttacagtattccag
ccgacgcaaattcaagagcctcctgttaccactaccagtaccactaccactgatgaatta
aaaacagtgacaaaagatggtatagaagacattaaaatattgattgcatctccatctcct
acccatgtacctaaagtaactgctagtgccacaacatcaccatacagtgatactggaagt
cggacagcctcaccaaacagagcaggaaaaggagtcatagaacagacagaaaaatctcat
ccaagaagccctaacgtgttatctgtcactttgagtcaaagaactaccattcctgaggaa
gaactaaatccaaagatactagctttgcagaatgctcagagaaagcgaaaaatagaacag
gatggttcactttttcaagcagtaggaattggaacattattacagcagccagacgatcgt
gcaactactacatcactttcttggaagcgcgtaaaaggatgcaaatctagtgaacacagt
ggaatggagcaaaagacaattattttaataccctctgatttagcgtgtagactgctgggg
caatcaatggatgagagtggattaccacaactgaccagttatgattgtgaagttaatgct
cctatacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggatcaa
gttaactga
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