Zalophus californianus (California sea lion): 113909005
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Entry
113909005 CDS
T07874
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113909005 (PNN)
03015 mRNA surveillance pathway
113909005 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113909005 (PNN)
03041 Spliceosome [BR:
zca03041
]
113909005 (PNN)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113909005 (PNN)
Spliceosome [BR:
zca03041
]
Complex C
Other components
EJC/TREX
113909005 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
113909005
NCBI-ProteinID:
XP_027425641
UniProt:
A0A6J2B3L1
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Position
6:complement(57764010..57770974)
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AA seq
759 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAHLQALP
QPQPEPQLQPELQPQLQPEPQPQLQSQPQPQPQPQPQPQPQPQPHPHPLPHPQAILQPQP
LSQPETLPLAVLQPPIQVFQEQGHLLPERKEFPMESVKLTEVAVEPVLTVHSESKTKTKT
RSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSS
RDSSSSSTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGS
KDKNSRSDRKRSMSESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtaagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatattcgcaagctcaccggacgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaaggagagaatcacgccaagaaagc
gacccagaggatgatgatgtcaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttattgatgggcactcttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcgccttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggcgaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagtggaaagtgtagaaccttcagaaaacgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcccgtgaaagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagaaagagtctgagccccagcctgagcctgtggctcacctccaggccctgcct
cagcctcagcctgagcctcagcttcagcctgagctgcagccgcagctgcagcctgagccc
cagccacagctgcagtcccagccccagccccagccccagccccagccccagccccagccc
cagccccagccccacccccaccccctcccccacccccaagcaatactccaaccccagcct
ctctctcagcctgagactttgccattagctgttttacagccaccaattcaggtttttcag
gagcaagggcatttactacctgagaggaaggaatttcctatggaatctgtaaaactcact
gaggtggcagtagagccagtcttgacagtacattcagagagcaaaaccaaaaccaaaact
aggagcagaagtagaggtcgagctagaaataaaaccagcaagagcagaagccgcagcagt
agcagtagtagttctagcagcagttccaccagtagcagcagtggcagcagctccagcagt
ggcagcagtagtagtcgaagtagttccagtagcagctccagcaccagtggcagcagcagc
agagacagtagcagcagcagcactagtagtagtgagagtagaagtcggagtaggggccgg
ggacataatagagatagaaagcacagaaggagcgtggatcggaagcgaagggatacgtca
ggactagagagaagtcacaaatcttcaaaaggtggtagtagtagagatacaaaaggatca
aaggataagaattcccggtccgacagaaagaggtctatgtcagagagtagtcgatcaggc
aaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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