Zalophus californianus (California sea lion): 113909079
Help
Entry
113909079 CDS
T07874
Symbol
INO80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113909079 (INO80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113909079 (INO80)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
113909079 (INO80)
INO80 complex (yeast)
113909079 (INO80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
113909079
NCBI-ProteinID:
XP_027425869
UniProt:
A0A6J2B1Z9
LinkDB
All DBs
Position
6:complement(83093043..83225141)
Genome browser
AA seq
1562 aa
AA seq
DB search
MASELGAGDDGGCTELAKPLYLQYLERALRLDHFLRQTSAIFNRNISSDESEDGLDDSNP
LLPQSGDPLIQVKEEPPNSLLGETSGAGNSGMLNTYSLNGVLQSESKSDKGNLYNFSKLK
KSRKWLKSILLSDESSEADSQSEDNEEEEEEEEELHLSREELHNMLRLHKYKKLHQNKYS
KDKELQQYQYYSAGLLSTYDPFYEQQRHLLGPKKKKFKEEKKLKAKLKKVKKKRRRDEEL
SSEESPRCHHHQTKVFAKFSHDAPPPGTKKKHLSIEQLNARRRKVWLSIVKKELPKANKQ
KASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARRLTKEMLLYWKKYEKVEK
EHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEIL
RKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAYHIHQARTRSFDEDAKE
SRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQ
GINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKV
LPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQ
ALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSK
DIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLY
QALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISL
KPYQISKFIYRHGQIRVFNHSRDRWLRVLLSPFAPDYIQQSLFHRKGVNEESCFSFLRFI
DVSPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGEPEGESQQRYLRNKDFLLGVN
FPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVIHQRRSATSSLRCCLLTELPSFLCVAS
PRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAG
GLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLE
EYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFY
DSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF
KPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDEL
DGKRRKEGVNLVIPFVPSADNSNLSADGDDSFVSVDSAMPSPFSEISISSELHTGSIPPD
ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEMPAVGRGHSARSRGRP
KGSGSTAKGAGKGRSRKSTAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGISASSPLQT
SLVRPAGLADFGPSSASSPLSSPLSKGNNVPGTPKSLHLTSSLAPDSLVRKQGKGTNPSG
GR
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggagttgggagccggggacgatggcggctgcactgagctggcaaagcccctc
tatcttcaatacttggagagggccctccggttggaccatttcttgcgacaaacatcagcc
atcttcaacaggaacatttctagtgatgagagtgaggatggactggatgacagtaatcct
ttattgccccagtctggggatcccttaatacaagttaaggaagaacctccaaattcattg
cttggagaaacttctggagcaggcaactctggaatgttaaacacatactcgctgaatgga
gttctacagtcagaatcaaaatctgacaaagggaatttatataacttctctaagttgaag
aaaagcagaaagtggctaaagagcattctgctaagtgatgagtccagtgaggcagattct
cagagtgaagacaatgaagaagaagaagaagaagaggaagaactccacctcagcagagaa
gaacttcataacatgttgcggctgcacaagtataagaaacttcaccagaataagtatagc
aaagataaggagttgcagcagtaccaatactacagtgcaggcctgctttccacatacgac
ccattctatgagcaacaacggcacctacttggacccaaaaaaaagaaattcaaggaggaa
aagaagcttaaagccaagttgaaaaaagtgaagaaaaaaaggcgaagggatgaagaactt
tcctctgaagaatctcctcgttgccaccaccatcagaccaaagtctttgccaagttctct
catgatgcacctcctcctggcaccaagaagaagcacttatccattgagcagcttaatgct
cgtcgcaggaaagtatggctcagcattgtgaaaaaggaactaccaaaggccaacaagcag
aaagcttcagctcgtaacctgtttctcaccaatagccgaaagcttgcccaccagtgcatg
aaggaggtgcgtcgagctgccttgcaggcccaaaagaactgtaaggagaccttgcctcgt
gcccgccgcctcaccaaggagatgcttctgtactggaagaagtatgagaaggtggagaag
gaacatcgcaagcgtgcagagaaggaggccttggagcagcggaagttggatgaggaaatg
cgggaggccaagaggcaacagcgaaaactgaacttcctaatcacccaaacagagttgtat
gcccatttcatgagtcgcaaacgagacatgggtcatgatggaattcaggaagaaattcta
aggaaactggaagacagttctacccaaagacaaattgacattggtggaggggtggtagtt
aacatcacacaggaggattatgatagtaaccatttcaaagcccaggccctgaagaatgct
gagaatgcttatcatattcatcaagctcggacaaggtcatttgatgaagatgcaaaagaa
agtcgagcagctgcccttcgggcagcaaacaagtctggcactgggtttggggagagttac
agcctggcaaacccatctatccgggctggggaagatattccacagcctacaatttttaat
ggcaaattaaaaggctatcagctgaaaggcatgaattggttggctaatctctatgaacag
ggcattaatggcattcttgcagatgaaatgggccttggtaaaacagtgcagagtattgcc
ctcctggcccatctggctgagagagagaacatttggggacctttcttaataatttcaccg
gcttctacacttaacaattggcaccaggaatttactagatttgttcctaaatttaaggtg
ctaccatattggggaaatcctcatgatagaaaagttatcaggaggttctggagtcagaag
accctctacactcaggatgcccccttccatgtggttatcaccagctaccagctggtggtg
caggatgtaaagtatttccagcgtgtcaagtggcagtacatggtattggatgaggctcag
gcactcaagagtagttccagtgttcgttggaagattctcttgcagttccagtgtcggaat
cggcttttgctaactgggaccccaattcagaacaccatggcagagctctgggctctgcta
cattttattatgcccacattatttgattcacatgaggaatttaatgaatggttttccaag
gacatcgagagccacgccgaaaacaaatctgccattgatgagaatcaactctctcgatta
cacatgatcttgaagccatttatgctgaggagaatcaagaaagatgtagaaaatgaattg
tctgacaagattgagattctgatgtattgccaactgaccagccgacagaagcttctatat
caggcactaaagaacaaaatttctattgaggatttattgcagtcttctatgggttctacc
cagcaagcacagaccaccaccagcagcctcatgaatctggtcatgcagtttaggaaggtg
tgtaatcacccagagttatttgaacgacaagaaacttggtctccatttcatatttcccta
aagccataccagatttcaaagtttatctaccgtcatggacagatcagggtcttcaaccat
tcacgagacaggtggttaagggttcttctttctccatttgcaccagactatatccagcag
tctctctttcacagaaaaggtgttaatgaagaaagctgtttctccttccttcgctttatt
gatgtatctccagcagaaatggcaaacctcatgcttcagggacttttggccagatggtta
gctcttttcctgtctctgaaagcctcctacaggctccatcagctgcgctcctggggagag
ccagaaggggagagccagcagagatatctgagaaacaaggatttccttcttggggttaat
tttccactctcctttcccaacctttgcagctgccctttgttaaagtctctggttttcagc
agccactgtaaagcagtgagtggctactcagaccaggtcatccatcagcggagatcagct
acctcctcgcttcgttgctgcctgctcactgaactgccatcttttttgtgtgtggccagt
ccacgagttaccgcagtgccattggattcttactgcaatgaccgaagtgcagaatatgag
cggcgagtgctgaaggaaggagggagtctggcagccaagcagtgtttgttaaatggggcc
cctgaactggcggcagattggctaaatcgacggtcccagttcttcccagagccagctgga
ggactgtggagcatcaggcctcagaatggctggtctttcatcaggattccaggcaaggag
agcctcatcactgacagtggaaagctgtatgcccttgatgtcctcctgactcggctcaag
tctcaaggacatagggtccttatctactcccagatgaccaggatgatagacctgctggag
gaatacatggtttacaggaagcatacctacatgaggcttgatggctcatccaagatctca
gagaggcgggacatggttgcagattttcagaacaggaatgacatctttgtattcctgcta
agcacacgagctggaggactgggtatcaatctcactgctgcagatacagtgattttttat
gatagcgactggaaccccactgtggaccagcaggccatggacagagcccaccgcttgggg
cagacaaagcaggttactgtgtaccggctcatctgtaaaggcaccattgaagaacgcatt
ctacagcgagccaaggagaagagtgagattcagcggatggtgatttctggtgggaacttc
aaaccagataccttaaaacccaaagaggtggttagtcttcttctagatgatgaagagctg
gagaagaaattgagactgcggcaagaagagaaacggcagcaggaggaaaccaaccgagtc
aaagagcgcaagcgcaagcgggaaaagtatgcagagaagaagaaaaaggaagatgaattg
gatgggaaaaggagaaaggagggcgtgaacctagtgatcccattcgttccctcggctgat
aactccaacctctctgctgacggggacgactccttcgttagcgtggactcggccatgccc
agccctttcagtgagatctccatcagcagtgagctgcacaccggctccatcccccccgac
gagagcagcagtgatatgctggtcatcgtggacgacccggcctcctcagccccccagtct
cgggccaccaactctcctgcctccataacaggctccgtttcagacactgtgaatggaatt
tccattcaggaaatgccagccgtaggacgtggtcactcagctcgaagccgaggccgcccc
aaaggttcaggaagcacagccaaaggagcagggaaaggccggagccggaagtccacagca
ggcagtgctgccgcaatggcaggagccaaagcaggggccgcggcagcctcggcagccgcc
tatgctgcatacgggtacaatgtgtctaaaggaatctctgccagcagtcctcttcagacg
tctcttgttcggcctgctggccttgctgactttggaccttcaagcgcctcttctcccttg
agttcccctttgagcaaaggaaataatgttcctgggactcccaagagcctccacttgacc
agcagcctagccccagactccctggtccggaaacagggcaaaggcaccaacccctctgga
ggacggtaa
DBGET
integrated database retrieval system
