Zalophus californianus (California sea lion): 113909476
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Entry
113909476 CDS
T07874
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113909476 (LINGO1)
Membrane trafficking [BR:
zca04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113909476 (LINGO1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
113909476
NCBI-ProteinID:
XP_027426473
LinkDB
All DBs
Position
6:114478975..114668706
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AA seq
620 aa
AA seq
DB search
MQVSERMLAGGARSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQERAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFS
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIG
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcggggggcgcgaggagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtgctgggctcggtgctgtcaggctcggccacc
ggctgcccgccccgctgtgagtgctcggcccaggagcgtgccgtgctctgccaccgcaag
cgcttcgtggcagttcctgagggtatccccaccgagacccgcctgctggacctgggcaag
aaccgcatcaagacgctcaaccaggacgagtttgccagcttcccgcacctggaagagctg
gagctcaatgagaacatcgtgagcgccgtggagcccggcgccttcaacaacctcttcagc
ctgcggacgctggggctgcgcagcaaccggctgaagctcatccccctcggcgtcttcacg
ggcctcagtaacctgaccaagctggacatcagcgagaacaagatcgtcatcctgctggac
tacatgttccaggacctgtacaacctcaagtcactggaggtcggcgacaacgaccttgtc
tacatctcccaccgggccttcagcggcctcaacagcctagagcagctgacgctggagaaa
tgcaacctgacctccatccccaccgaggcgctgtcccacctgcacagcctcatcgtcctg
aggctccggcacctcaacatcaacgccattcgggactactccttcaagaggttgtaccgg
ctcaaggtcttggagatctcccactggccctatttggacaccatgacacccaactgcctc
tacggcctcaatctgacctccctgtccatcacccactgcaacctgaccgctgtgccctac
ctggccgtgcgccacctggtctatctccgcttcctcaacctctcctacaatcccatcggc
accatcgagggctccatgttgcatgagctgctgcggctgcaggagatccagctggtgggc
gggcagctggccgtggtggagccctacgccttccgcggcctcaactacctgcgcgtgctc
aacgtctcgggcaaccagctgaccaccctggaggagtcggccttccactcggtgggcaac
ctggagacgctcatcctggactccaacccgctggcctgtgactgccggctcctgtgggtg
ttccggcgccgctggcggctcaacttcaaccggcagcagcccacgtgcgccacgcccgaa
ttcgtccagggcaaggagttcaaggacttccccgacgtgctcctgcccaactacttcacc
tgccgtcgcgcccgcatccgggaccgcaaggcgcagcaggtgttcgtggacgagggccac
acggtgcagtttgtgtgccgggcggacggcgacccgccgcccgccatcctctggctctcg
ccccgcaagcacctggtttcggccaagagcaacgggcgactcacagtcttccccgacggc
acgctggaggtgcgctacgcccaggtgcaggacaacggcacgtacctgtgcatcgcggcc
aacgcgggcggcaacgactcgatgccagcccacctgcacgtgcgcagctactcgcccgac
tggccccatcagcccaacaagaccttcgctttcatctccaaccagccgggcgagggagag
gccaacagcacccgagccaccgtgcctttccccttcgacatcaagaccctcatcatcgcc
actaccatgggcttcatctctttcctgggcgtcgtcctgttctgcctggtgctgttgttc
ctctggagccggggcaagggcaacacgaagcacaacatcgagatcgagtacgtgccccgc
aagtcggacgcgggcatcagctccgccgacgcgccccgcaagttcaacatgaagatgatc
tga
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