Zalophus californianus (California sea lion): 113909572
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Entry
113909572 CDS
T07874
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113909572 (WDHD1)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113909572 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
HMG_WDHD1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
HMG_box
Beta-prop_Nup120_160
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
113909572
NCBI-ProteinID:
XP_027426692
UniProt:
A0A6J2B8Y2
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All DBs
Position
6:43963060..44021375
Genome browser
AA seq
1128 aa
AA seq
DB search
MPAIQKPMRFGHTEGHTDVCFDDLGSYIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSC
ALKNGKLVTAVSNNTIQVHTFPEGIPDGILTRFTTNANHVVFNGDGAKIAAGSSDFLVKV
VDVMDCSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGTVKVWQISDQTCTVSWPLLQKC
NDVINAKSICRLAWQPKSGKLLAVPMEKSVKLYRRETWNNQYDLSDNFISQALNIVTWSP
CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRIAYTDAEGNLGLL
ENVCEPSGKTSSSKVSSRVEKDYNDLFDGDDTNNAGDFLNDNAVETPSFSKRIINDEEED
DDLMLASGRPRQRRHILEDDENSVDVTMLKTGSSLLKEEEEDDQADSIHNLPLVTSQRPF
YDGPMPTPRQKPFQSGSTPMHLTHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATH
LSNSLNYTVADLSYEAALLACESTDELASKLHCLHFSSWDSSKEWIVDMPQNEDIEALCL
GLGWAAAATSAMLLRLFTIGGVQKEVFSLPGPVVSMAGHGEQLFIAYHRGTGFDGDQCLG
VQLLELGKKKKQILHGDPLPLTRKSYLVWVGFSAEGTPCYVDSEGVVRMLNRGLGNTWTP
ICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIAT
EKGQMEEQFWRSVMFHNHLDYLAKNGYEYEESTKNQAIKEQQELLMKMLALSCKLDREFR
CVELADLMTQNAVNLAIKYASRSRRLILAQKLSELAVEKAAELSTTQVEEEEEEDFRKEP
NAGYSNTATEWSQPRLRNQVEEDAEDSREADDKEEKPELHKHGQNLFSKSTNPSDVPAVK
SGAVTSCSQGRVNPFKVSANSKEPATSVNSARSSNILDNMNKSSKKSALNRATNNEKSPV
IKPLVPKPKSKQASAASYFQKRTSQTDKTEDVKEERPKNSSSETPAMCPQNTENQRTKTG
FQMWLEENRSSILSDNPDFSDEADIIKEGMVRFRVLSAEERKAWASKAKGGTTSDGAEAK
KRKHVVDESHETENEKEKAKENLSLPKKQKPLDLSTNQKLSAFAFKQE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatacagaagccgatgagatttggacatacagagggacatacagatgtctgc
tttgatgatttggggagttatattgtgacttgtggaagtgatggtgatgtgaggatttgg
gaagacttggatgatgatgaccctaagtccattaatgttggagaaaaggcatattcatgt
gctttgaagaatgggaaattggtcactgcagtatccaataatactattcaagtccacaca
tttcctgaaggaattccagatggtatattgactcgcttcaccacaaatgcaaaccatgtg
gtctttaatggggatggtgcaaaaattgctgccggatctagtgattttctagtcaaagtt
gtggatgtgatggattgcagccaacagaaaacatttcgaggacatgatgctcctgtttta
agtctttcctttgatcctaaggacatctttctggcatcagctagttgtgatggaactgtc
aaagtgtggcaaatttcagatcagacatgtactgttagttggccactgcttcaaaaatgc
aatgatgtgataaatgcaaaatcaatctgcagacttgcttggcagccaaaaagtgggaag
ttactggcagttcctatggaaaagtctgttaagctatatagaagagaaacgtggaataat
caatatgatctttcagataatttcatctctcaggccctaaatatagtaacctggtctccc
tgtgggcaatatttagctgcagggagtattaatggtttaattatagtttggaatgtggaa
accaaagattgcatggaaagggtgaaacatgagaaaggttatgcaatttgtggcctggca
tggcatcctacttgtggtcgaatagcttatactgatgcagaaggaaatctagggctcctg
gagaatgtttgtgagcccagtggaaagacatcaagcagtaaggtttctagcagagtggaa
aaggattacaatgatctttttgatggagatgatacaaataatgctggtgattttctaaat
gacaatgcagtggagaccccctctttttcaaagaggattataaatgatgaggaagaggat
gacgacctcatgctggcctcaggtcgtcctagacagcgacgccacatcctagaagatgat
gaaaactcagttgatgttacaatgttaaaaactggttctagtcttctcaaagaagaggag
gaagatgatcaggcagacagcattcataatctaccacttgtaacgtcccaaaggccgttt
tatgatgggccaatgccaactcctcggcagaagccattccagtcaggttctacgcccatg
catctcacacataggttcatggtgtggaactctgttggaattattcgctgctataatgat
gaacaagacaatgccatagatgtggagttccatgatacctccatacaccatgcaacacat
ttatcaaacagtttgaattacacagtagcagatctttcttatgaagctgctttgttggca
tgtgaaagcactgatgaactagcaagcaagcttcactgtctgcactttagttcttgggat
tcaagcaaagagtggatagtagacatgcctcagaatgaagatattgaagctctatgtctt
ggtctgggatgggcagctgctgccaccagtgccatgctccttcgattgttcactattgga
ggtgttcagaaagaggtcttcagtcttcctgggcctgtagtatcaatggcaggacatgga
gaacagcttttcattgcttatcatagaggtacaggatttgatggtgatcagtgccttgga
gttcaactgctagagctggggaaaaagaaaaaacaaattttacatggtgatcctcttcct
cttacgaggaaatcctacctagtgtgggttggattttcagctgaaggtaccccctgttac
gtggattcagaaggcgttgttcgaatgcttaacagagggcttggtaatacatggactccc
atatgtaacacaagagaacactgcaaaggaaaatctgatcactactgggtggttggtatc
catgaaaatccccagcaactgaggtgcattccttgcaaaggttctcggtttcctcccact
cttccgcgccctgctgtagctatattatcctttaagcttccttattgtcagattgcgaca
gagaaaggacaaatggaggaacaattttggcgttccgtcatgtttcacaatcaccttgat
tatttagctaaaaatggttatgaatatgaagaaagcactaaaaatcaagcaataaaagaa
caacaggagcttttaatgaaaatgcttgcgctttcttgtaaactggatcgggaattccgt
tgtgtggaactagctgatttaatgactcaaaatgctgtgaatttagccattaaatacgct
tctcgttcccggagattaatattggcccaaaaacttagtgaactggctgtagagaaggca
gctgaattatcaacaacccaggtagaagaagaggaagaggaggattttagaaaagagccg
aatgctggttacagtaatactgctacagagtggagccagccaagactcagaaaccaagtg
gaagaagatgcagaggacagcagagaagctgatgataaagaagaaaaaccagaattacat
aagcatggacagaatctattttccaaaagtacaaatccctctgatgtgccagctgttaag
tcaggtgcagttacctcttgcagccaaggacgagtaaaccccttcaaggtatcagccaat
tccaaagagccagccacttcagtgaattcagcccgttcaagtaatattttagacaatatg
aacaaatcatccaagaaatctgcacttaatcgagctacaaataatgaaaagtctccagtt
ataaagcctctagttccaaagccaaagtccaagcaggcatctgcagcatcctatttccag
aaaagaacttcccaaactgataagactgaggatgtgaaagaagaacgtcctaaaaattca
tcatctgaaacaccggctatgtgtcctcaaaacactgaaaaccaaaggacaaagactggg
ttccagatgtggctggaagaaaacagaagtagtattttgtctgacaatcctgacttttca
gatgaagcagacataataaaagaaggaatggttcgatttagagtattgtccgctgaagaa
aggaaggcatgggcttccaaggccaaaggaggaactacaagtgatggagctgaagcaaag
aagcgaaaacatgtggttgatgaaagtcatgaaactgaaaatgagaaagaaaaagcaaag
gagaatctgagtttgcctaaaaagcaaaaacctttagatctttctaccaatcagaaactg
tcagcttttgcatttaagcaggaatag
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