Zalophus californianus (California sea lion): 113909755
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Entry
113909755 CDS
T07874
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04140
Autophagy - animal
zca04142
Lysosome
zca04148
Efferocytosis
zca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113909755 (VPS18)
04140 Autophagy - animal
113909755 (VPS18)
04148 Efferocytosis
113909755 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113909755 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113909755 (VPS18)
Membrane trafficking [BR:
zca04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113909755 (VPS18)
Hops complex
113909755 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113909755
NCBI-ProteinID:
XP_027427080
UniProt:
A0A6J2B516
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All DBs
Position
6:83014396..83023159
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESGTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFAGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCS
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEDDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARTKEAEGGAAMAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagcct
ggctgccccagcgtgggcatcccccactccgggtatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaagcagcgcattgactttaccccttctgaacgaattaccagtctt
gtcgtctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ttgggcaaggcaaatgaacccaaccacgtggagctggggcgcaaggatgatgccaaggtt
cacaagatgtttctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtccggccactggcgcgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggcaccgagagcggcactggccccatc
ctggtcggcaccgcccaaggccagatcttcgaagcagagctctcagccagcgagggtggg
ctttttggccccgccccagatctctacttccgcccattgtatgtactaaacgaagaaggg
ggtccagcacctgtgtgctccctcgaggccgagcggggccctgacgggcgtggctttgtt
atcgccaccacccggcagcgcctcttccagttcataggtcgagcagcagagggagctgag
gcccagggctttgcggggctctttgctgcctacgccgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggccttctatacccccaagttgcgctctgca
cctcgggccttcgcctggatgatgggggatggcgtgttgtacggagcattggactgcagt
cgtcccgattccctgctgagcgaggagcgagtgtgggagtacccagagggggtaggtccg
ggggccagcccacccctggctatcgtcctgacccagttccacttcctcctgctgctggcg
gaccgggtggaggcagtgtgcacactgacggggcaggtggtgctgcgggatcacttcctg
gagaagtttgggcccctgaagcacatggtgaaggactcttccacgggccacctgtgggcc
tacactgagcgtgccgtcttccgctaccacgtgcagcgggaggcccgggatgtctggcgc
acctacctggatatgaaccgcttcgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggccgatttctgctttcgccagcgtcgttacctg
gagagtgcccgctgctacgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccggtttg
aagccagccgagcgcacccaggccacactgcttaccacctggctgacagagctttatctg
agccggctcggagcactgcagggtgatcctgaggccctgaacttataccgggaaacacgg
gagcgcttccggtccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccacgaactgcttgccagccacggggacacagaacacatggtgtacttcgcc
gtgatcatgcaggactacgagcgcgtggtggcataccactgccagcatgaggcctatgag
gaggccctggcggtgcttgctcgccaccgtgacccccagctcttctataagttctcgccc
atcctcattcgtcacatcccccgccagctggtggatgcttggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaagcccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtactcggcgagacggag
caggcaattcacaattacctgctgtcgctatatgcccggggccagccagcctcactgctg
gcctaccttgagcaggccggcgccagcccacaccgcgtgcattacgacctcaagtatgcg
ctgcgtctctgtgctgagcacggccaccaccgtgcctgtgtccatgtctataaggtccta
gagctgtacgaggaggctgtggacctggccctgcaggtggacgtggacctggccaaacag
tgtgctgacttgcctgaggacgacgaggagctgcgtaagaagctgtggctgaagattgct
cggcacgtggtacaggaggaggaggacgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggacgtgctgccgttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcactcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagacctgcaggagctg
cggggccgctacggcacggtggagccacaggacaagtgtgccacctgtgacttccccctg
ctcaaccgccctttttaccttttcctctgtggccacatgttccatgctgactgcttgctg
caggccgtgcggcctggcctgccagcctacaagcaggcccggctcgaggagctgcagcgg
aagttgggggctgctccggcccctaccaagggctctgcccgcaccaaggaggccgagggt
ggggctgccatggcggggcccagtcgggaacagctcaaggctgacctcgatgaactggtg
gccgccgagtgtgtgtactgtggggagctgatgatccgctccattgatcggcccttcatt
gacccccagcgctatgaggaggagcacctcagttggctgtag
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