Zalophus californianus (California sea lion): 113909853
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Entry
113909853 CDS
T07874
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zca00535
]
113909853 (CSPG4)
04091 Lectins [BR:
zca04091
]
113909853 (CSPG4)
Proteoglycans [BR:
zca00535
]
Cell surface proteoglycans
Others
113909853 (CSPG4)
Lectins [BR:
zca04091
]
C-Type lectins
Others
113909853 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113909853
NCBI-ProteinID:
XP_027427262
UniProt:
A0A6J2BAM5
LinkDB
All DBs
Position
6:complement(114379147..114415034)
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AA seq
2323 aa
AA seq
DB search
MCSGQQPVPPAPALALALTLAMLARLSSAASFFGENHLEVPVATVLTDIDLRLQFSTSQP
EALLLLAAGQADHLLLQLHSGRLEVRLTLGQEELRLQTPAETLLSNSALHTVELTVSDSE
ALLSVDGLLNTSAPILGAPLEVPYGIFLGGPGSLSLSYLRGASRPLRGCLHAATLNGRNL
LRPLTPGVHEGCAEEFSADDSVALGFSGPHSLAAFPAWSTREEGTLEFILTTRSQQAPLA
FQAGGRHGDFIYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHVDAHQLEISV
DQYPTRTSNRGVFSYLDPRGSLLLGGLDTNSSRHLQEHRLGLAPGAVTVSLLGCMEDLSI
NGQRQGLREALLTRGMAAGCRPEEDEYEEDPYGPYEAFSTSAPEAWPAMELPEPCVPEPG
LPPIFANFTQLLTVSPLVVAEGGTAWLEWRHVQPTLDLSEAELRKSQVLFSVSRGARHGE
LELDIPGAQARKMFTLLDVVNRKARFIHDGSEDTSDQLMLEVSVTARGPVPSCLRRGQTY
ILPIQINPVNDPPRIIFPHGSLMVILEHTQKPLGPDVFQAYDPDSACEGLTFQLLGTPTG
LPVERRDQPGEPATEFSCRELEAGSLIYVHRSGPAQDLTFRVSDGLQASPPATLKVVAVR
PTIQIRHNTGLRLAQGSAAPVLPTNLSVETNAVGQDVSVLFRVTEALQFGELQKQGAGGA
EGAEWRATQAFQQRDVEQGRVRYLSTDPQHRTKDTMEKLALEVQVGQEILSNLSFPVTIQ
RATVWLLRLEPLHTQNTHQEALTTAHLEATLEEEAGPSPTTFHYEVVQAPRKGNLRLQGT
RLSDGQGFTQDDLQAGWVTYGATARTSETVEDTFRFRVTAPPHFSPLYTFPIHIGGDPDA
PVLTNILLSVPEGGEGTLSADHLFVKSLNSANYLYEVMERPRHGRLVWRGAQDKATAVTS
FTNEDLLRGRLVYQHDNSETTEDDIPFVATRQSDGSGGTAWEEVRGVFRVAIQPVNDHAP
VQTISRVFHVARAGQRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAAEEPTRPIY
RFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLHVANGSSLVVPQ
GGQGTIDTAVLHLDTNLDIRSGDEVRYHVTAGPHWGQLLRAGQPATAFSQQDLLDGAILY
SHDGSLSPRDTLVFSVEAGPVHTDATLQVTIALEGPLAPLHLVRHKKIYVFQGEAAEIRK
DQLEAAQEAVAPADIVFSVKTPPRAGYLVMLSHGASAAGPPSLDPVQSFSQEAVDAGRVL
YLHSHPEAWRDTFSLDVASGLGAPLEGVHVELEVLPAAIPLQTQNFSVPEGGARTLAPPL
LRVTGPYFPALPGLELQVQEPPQHGALRREDGPRDGTLSAFSWKEVEQQLIRYVHDGSET
LTDSFILVANASEMDRQSQPVAFTVTILPVNDQPPILTTNTGLKMWEGATVPFPPEALRG
TDSDSGPEDLVYTIEQPSNGRVVLRAAPGTEVHSFTQAQLDGGLVLFSHRGALDGGFRFS
LSDGEHTSPGHFFRVTAQKQLLLSLEGSRTLTVCPGSVQPLSSQSLRASSSAGTDPRHLL
YRVLQGPRLGRLFRAQQGSTGEALVSFTQAEVSAGNVLYEHAMPPEPFWEVHDALQLQLS
SPPAPDVATTLVVAVSFEAACPRRPSRLWRNQGLWVPEGQRAEITTAALDASNLLASIPS
PQRPEHDVLFQIIQFPTRGQLLVSEEPLHAGRPHFLQSELAAGQLAYAHGGGGTQQDGFR
FRAHLQGPAGASVAGPQTSEAFAITVRDVNERPPRPQASVPLRLTRGSRAPVSRAQLSVV
DPDSAPGEIEYEVQRAPLNGFLSLAGAGPGPVTRFTQADVDAGRLAFVANGSSVAGILQL
SASDGASPPVPVSLAVDVLPSAIEVQLRAPLEVPQALGRSSLSRQQLRVVSDRDEPDAAY
HLMGGPRFGQLLVAGQPAATFSQLQVDQGEVVFTFTNFSSSRDHFSILALARGANASATV
NVTVRALLRVGAGGPWPQGATLRLDSTVLDAGELANRTGSVPRFRLLAGPRHGRVVRVPR
ARTEPRDSQLVEQFTQQDLEDGRLGLEVGSPEGRSPGPMGDSLTLELWAQGVPPAVASLD
FDTEPYDEARPYSVALLSLPEPAQTEARKPESSTPTGEPGPFTSSPVPTVASGGFLGFLE
ANMFSIIIPVCLVLLLLALILPLLFYLRKRNKTGKHDVQVLTAKPRNGLAGDTETFRKVE
PGQAIPLTAVPSQGPPPGGQPNPELLQFCRTPNPALKNGQYWV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgggccagcagcccgtgcctccggcccctgccctggccctggctttgaccttg
gctatgttggccagactctcatccgcagcctccttcttcggagagaaccacctggaggtg
cccgtggccacggttctgaccgacatagacctccggctacagttctccacgtcccagccc
gaagccctgcttctcctcgcagcaggccaggcggaccacctcctcctgcagctccactct
ggacgtcttgaggtcagactcaccctgggccaggaggagctaaggctgcagaccccagct
gagactctgctgagcaactccgccctccacactgtggagctgaccgtttcagacagcgag
gccttgttgtccgtcgatgggctcctgaacacctcagcccccatcctgggggctcccctg
gaggtcccctatgggatcttcctggggggccctgggagccttagcctgtcctacctgagg
ggagctagccggcccctgaggggttgcctccacgctgccaccctcaatggccgcaacctg
ctccgacccctgaccccaggcgtgcacgagggctgtgctgaagagttttctgctgatgac
agtgtggctctgggattctctgggccccactcactggctgccttccctgcctggagcact
cgggaggaaggcaccctggagtttatactcaccactcggagccaacaggcacccctagcc
ttccaggcagggggccggcatggggatttcatctatgtggacatatttgagggccacctg
cgggctgtggtggagaagggccagggcacagtattgctccacaacagcgtgcctgtggcc
gatgggcaaccccatgaggtcagcgtccacgtggatgctcaccagctggaaatctccgtg
gaccagtaccctacacggacttccaaccgtggggtcttcagctatctggacccacgtggc
agtctcctcctgggggggctggacaccaactcttctcgccatctccaggaacaccgcctg
ggcctggccccaggggccgtcactgtctcgctgctaggttgcatggaggacctcagcatc
aatggccagaggcagggactccgggaagccttgctgacgcgcggcatggcggccggctgc
aggccggaagaagacgagtatgaggaggacccctatggcccgtatgaagctttctccacc
tcggcacctgaggcttggccagccatggagctgcctgagccctgtgtccctgaaccaggg
ctgcctcctatctttgccaatttcacccaactgctgaccgtcagccccctggtggtggcc
gagggtggcacggcctggctcgaatggcggcacgtgcagcccacactggacctgagcgag
gccgagctgcgcaaatctcaggtgctgttcagcgtgagccgcggggcacgccacggtgag
ctcgagctagacatccccggtgcccaggcacggaaaatgttcaccctcctggacgtggtg
aaccgcaaggcccgcttcatccacgatggctctgaggacacctccgaccagctgatgctg
gaggtgtctgtgacggccaggggccccgtgccctcctgccttcggaggggccaaacttac
atcctgcccatccagataaaccctgtcaatgacccaccccgtatcatcttcccacacggc
agcctcatggtgatcctggagcacacacagaagccactggggcccgacgtttttcaggct
tacgacccagactccgcctgcgagggcctcaccttccagctccttggcacccccaccggc
ctccccgtggagcgccgagaccagcctggggagccagcaactgagttctcctgccgggag
ctagaggcgggcagcctcatctatgtccaccgaagtgggcccgcccaggacctgacgttc
cgggtcagcgacgggctgcaggccagccctcccgccacactgaaggtggtggctgtccgg
cccaccattcagatccgccacaacacagggctgcgcctggcccagggctctgctgcccct
gtcttgcccaccaacctgtcggtggagaccaatgctgtggggcaggatgtgagcgtgctg
ttccgagtcacggaggccctgcagttcggggagctgcagaagcagggggcaggtggggcc
gagggtgctgagtggcgggccacacaggcattccagcagcgggatgtggagcagggccgc
gtgagatacctgagcactgacccgcagcatcgcaccaaggacaccatggagaagctggcc
ctggaggtacaggtgggccaggagattctgagcaatctgtccttcccagtgacaatccag
agagccacggtgtggctgctgcggctggagccactgcacactcagaacacccatcaggag
gcgctcaccacagcccacctggaggccaccttggaggaggaggcaggccccagccccacc
accttccactatgaggtggtccaggcccccaggaagggcaatcttcggctacagggcaca
cggctctctgacgggcagggcttcacccaggatgacctgcaggccggctgggtgacctat
ggggccacggcccgcacctcagagacagtcgaggacaccttccgcttccgtgtcacagcc
ccgccgcacttctccccactctacaccttccccatccacattggtggtgacccggacgct
cccgtcctcaccaacatcctcctctcagtgcccgagggtggtgagggcaccctctctgct
gaccacctcttcgtcaagagtctcaacagtgccaactacctctacgaggtcatggagcgg
ccccgccatgggaggctggtttggaggggggcgcaagacaaggccaccgcggtgacatcc
ttcaccaacgaggacctgctgcggggccggctggtctaccagcatgacaactccgagacc
acagaagacgatatcccctttgtggcgacccgccagagtgatggcagtggtggcacggcg
tgggaggaggtgcggggcgtcttccgcgtggccatccagcccgtaaacgaccacgctccc
gtgcagaccatcagccgcgtcttccacgtggcccgggctgggcagcggctgctgacgaca
gatgacgtggccttcagtgatgctgactccggctttgctgacgctcagctggtactgacc
cgcaaggacctcctcttcggcagcatcgtggccgcggaggagccaacgcggcccatctac
cgcttcacccaggaggacctcaggaagaggcgggtcctgtttgtgcactcgggggccgac
cgtggctggatccagctgcaggtgtctgatgggcagcaccaggccaccgcgctgctcgag
gtgcaggcctcagagccctacctccacgtggccaatggctccagcctcgtggtccctcaa
ggaggccagggcaccatcgacaccgctgtgctccacttggacaccaacctcgacatccgc
agtggggatgaggtccgctaccatgtcacagccggtccacactgggggcagctgctccgg
gccggccagccagccacggccttctcccaacaggacctgctggacggggccattctctat
agccacgacggcagcctcagccctcgagacaccctggtcttctccgtggaggcagggcct
gtgcacacagacgccaccctgcaagtgaccattgccctagaggggccactggccccactg
catctggtccggcataagaagatctacgtcttccagggggaggcagctgagatcagaaag
gatcagctggaggcagcccaggaggcagtggcacccgcggacattgtgttttcggtgaag
acgcccccgcgggccggctacctggtgatgctgtcccacggtgcctcggcggcagggcca
cccagcttggacccggtgcagagcttctctcaggaggcggtggatgccggcagggtcctg
tacctgcactcccacccggaggcatggagggacaccttctccctggatgtggcctcaggc
ctgggtgcacccctggagggtgtccacgtggagctggaggtgctgcctgctgccatcccc
ctgcagacgcagaacttcagcgtccctgagggcggggcccgcacgctggcccctccactg
ctccgcgtcaccgggccttacttccctgcgctgccaggcctggagctgcaggtgcaagag
ccaccccagcacggggccctgcggagagaggacggtccccgagacgggaccctcagcgct
ttctcctggaaagaggtggaacagcagctgatccgctatgtgcacgatgggagtgagacg
ctgacagacagcttcatcctggtggctaatgcctcagagatggaccgccagagccaacct
gtggccttcaccgtcaccatcctgcccgtcaatgaccaaccccccatcctcaccacaaac
acaggtctgaagatgtgggagggggccacggtgcccttccctccggaggctcttaggggc
acagacagcgactcaggaccggaggacctggtctacaccatcgagcagcccagcaatggg
cgggtggtgctgcgggcagcgccaggcaccgaggtccacagcttcacccaggcccagcta
gacggcgggctcgtgctgttctcacacagaggcgccctggacggcggctttcgcttcagc
ctctccgacggggagcacacttcccccggacacttcttccgcgtgacggcccagaagcag
ctgcttctctccctggagggcagccggacgctgaccgtatgcccagggtcagtccagccg
ctcagcagccagagcctgagagccagctccagcgcaggcaccgacccccggcacctgctc
taccgtgtgctgcagggcccccggctgggccggctgttccgtgcccagcagggcagcact
ggggaggccctggtgagcttcactcaagccgaggtgtctgctgggaatgttctatatgag
cacgcgatgcctcctgagcccttctgggaggtccacgatgccctgcagctccagctgtcg
tcaccccctgcccccgatgtggctaccactcttgttgtggctgtgtctttcgaggctgcc
tgtccccggcgccccagccgcctctggaggaaccaaggtctctgggtccccgaaggccag
cgggccgagatcaccacggccgccctcgatgcctccaacctcctggccagcattccgtca
ccccagcgcccagagcatgacgtactcttccaaatcatacagttccccacccggggccag
ctgttggtgtccgaggagcccctccacgccggccggccccacttcctgcagtccgagctg
gctgcagggcagctggcctatgcccacggcggcgggggcactcagcaggatggcttccga
ttccgtgcccacctccaggggccagcgggggcctccgtggcgggaccccaaacctcagag
gccttcgccatcaccgtgcgggacgtgaatgagcggccacctcggccacaggcgtccgtg
ccactccggctcacccggggctcccgcgcgcccgtctcgcgggcccagctcagtgtggtg
gacccagactcggcgcctggggagatcgagtacgaggtgcagcgtgcccccctcaacggc
ttcctgagcctggcaggggccggcccagggcccgtgacccgcttcacgcaggccgatgtg
gacgccgggcggctggccttcgtggccaacgggagtagcgtggctggtatcttgcagctg
agcgcatccgacggggccagccctcccgtgcccgtgtccctggccgtggacgtcttgcca
tcggccatcgaggtgcagctgcgtgcgcccctagaggtgccacaggccctggggcgctcc
tcactgagccggcagcagctgcgtgtggtgtcagaccgggacgagccggacgctgcctac
cacctcatgggggggccccggttcgggcagctcctagtggccgggcagcccgccgccacc
ttcagccagctccaggtagaccagggggaggtggtcttcaccttcaccaacttctcctcc
tctcgtgaccacttcagcatcctggcactggcccgaggtgccaacgcgtcagccacagtg
aacgtcaccgtcagggctctgctgcgcgtgggagcgggtgggccgtggccccagggggcc
accctgcgcctggactccactgtcctagatgccggcgagctggccaaccgcacgggtagt
gtgccccgtttccggctcctggcgggaccccggcatggccgcgtggtccgcgtgccccgg
gccaggacggagcccagggacagccagcttgtggagcaattcacccagcaggaccttgag
gatggaaggctggggctggaggtaggcagtccagagggtcggtcccccggccccatgggc
gacagtctcactctggagctctgggcacagggtgtcccccctgccgtggcctcgctggac
tttgacactgagccttatgatgaggcccgaccctacagcgtggccctgctcagtctcccc
gagcctgctcagacagaagcaaggaaaccagagagcagcacccccacgggggagccaggc
ccgttcacctccagccccgtgcccaccgtggccagtgggggcttcctgggcttcctggag
gccaacatgttcagtatcatcattcccgtgtgcctggtcctcctgctcctggcactcatt
ctgcccctgctcttctacctccgcaaacgcaataagacaggcaagcacgatgtccaggtc
ctgactgccaagccccgcaatggcctagctggtgacaccgagaccttccgcaaggtagag
ccgggccaagccatcccgcttacagcggtgcccagccagggacccccaccggggggccag
cctaacccagagctgctgcagttctgccggacacccaaccctgctctcaagaatggccag
tactgggtgtga
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integrated database retrieval system
