Zalophus californianus (California sea lion): 113909898
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Entry
113909898 CDS
T07874
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113909898 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113909898 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113909898 (NDC1)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113909898 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113909898
NCBI-ProteinID:
XP_027427354
UniProt:
A0A6J2B662
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All DBs
Position
4:complement(43129346..43173733)
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AA seq
674 aa
AA seq
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MATAASRPCDGGSRDILWRVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSD
SFSDLYSSYVIFYLLLLSVVEVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFV
HAAMGMLVAWCAAVITKGQYSFLVVPCTGTESLNSPAAQTCLNECHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKA
WISTAMDLQIDEQFHRPLDTVRGLLNLSLLYHVWLCGVFLLMTWYISWILFRIFATEAHL
FPVQPPFSEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNSPEETTFQTPKSSQL
PRSSVPPLVKTSLFSSKLSTPDVGSPLRSPFGSSVVNRMAGIFDVNTCYGSSQSSQLIRR
GPRLWTSASDQQMTEFSIPSPSNSVSAEGKTARQPSLIYSWIQNKREQVKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccactgctgcgagtcggccttgcgacggcgggtcgcgggacatcttgtggcgcgtt
ttgggctggaggatagttgcaagtattgtctggtcagtgctgcttctacccatctgtacc
acagtatttataatcttcagcagcattgatttatttcatcctattcagtggctctctgat
tctttcagtgatctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggta
gaagtaataataagtatttttaatgtggagttctatgcagttgtgccttccattccctgc
tccagactggcactgatagggaagatcattcaccctcagcagctcatgcactcatttgtc
catgctgcaatggggatgctcgtggcttggtgtgctgcggtgataaccaagggtcaatac
agttttcttgtggttccctgcactggtactgagagtttaaatagccctgctgcacagacc
tgcttaaatgagtgtcaccttttttttctactggctggagcatttatgggctacagctat
agtctcctgtattttattaacaacatgaactatctgccatttcccatcatccagcaatac
aagttcttacgcttcaggagatctctgctcttgttagttaagcatagttgtgtggaatca
ctgtttctgattagaaatttctgcatcgtgtattattttcttggccatatccccaaagct
tggattagcactgcgatggaccttcagatagatgagcagtttcacaggcctcttgacact
gtgcgtggcctcttgaatctctcattactctaccatgtctggctgtgtggtgtctttctt
ctgatgacttggtatatctcatggatactcttcagaatctttgccacagaggctcatctg
ttccctgttcagccaccattttcagaagagtcagatgaatgcctcccgaaggttttgaac
agcagtcctcccctcatcataaagtatttggccttgcaggacctgatgttgctttctcag
tattctccttcacgaagacaggaagtttttagccttagccaaccaggtggacatccccat
aattggacagccatttcaagggagtgtttgaatcttttaaatgatatgactcagaaactg
gttctctaccaagaagccgctgctacgaatgggagaatggtgtcctcatactctgtggaa
cccaagaaatcgaattctccagaagaaactacttttcagaccccgaaatctagccagcta
cctcggtcttcagtgccaccgttagttaagacatcactgttttcctccaaattatctacg
cctgatgttggaagtcccctcagaagcccatttggctctagtgtagtgaatcggatggct
ggaatttttgatgtaaatacctgctatggatcctcccaaagttctcagctaataagaaga
gggccaagattgtggacttctgcttctgatcagcaaatgactgaattttctattccttct
ccatctaactctgttagtgctgagggtaagacagcgagacaacccagtttgatttattca
tggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcctctattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtctcacttagtagcagcatcatttactgaagataga
tttggagttgtccagactacactaccagctattcttaataccttgttgacgctgcaagag
gcagtcgataagtacttcaagcttcctcatgcttccagtaaaccacctcggatttcagga
agccttgtggacacttcttataaaacattaagatttgcatttagagcatcactaaaaact
gccatctatcgaataactactacatttggtgaacatttgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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