Zalophus californianus (California sea lion): 113910070
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Entry
113910070 CDS
T07874
Symbol
NPAS3
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113910070 (NPAS3)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113910070 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
113910070
NCBI-ProteinID:
XP_035584096
UniProt:
A0A6P9FF42
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All DBs
Position
6:complement(62373453..63214582)
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AA seq
985 aa
AA seq
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MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAAANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSELCMRKTPC
EVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQV
ELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVES
TSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRLRLRVALSHGRTVPSQ
IMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCY
HFIHAEDVEGIRHSHLDRKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWV
NYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQ
SENSEDPDPDRKKSGNACNNDMNCNEDGHSSSNPDSRDSDDSFEHSDFENPKAGEDGFGA
LGPMQIKVERYVESESDLRLQNCESLTSDSAKDSDSAGEAGAQASSKHQKRKKRRKRQKG
GSASRRRLSSASSPGGLDAGLVXPPRLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPP
NREISRNEXPYSMTKPPSSEHFPSXQGGGGGGGLHVAIPDSVLTPPGADGAAAARKTQFG
ASANAALAPVASDPLSPPLSASPRDKHPGGRRGGGGGGGGGGGGGGGSGPSTSNSLLYTG
DLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNA
HAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPXGNVFTTAEG
LFSTLPFPVYSNGIHAAQTLERKED
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggcg
gccgcgggggtgccggccggcgcgggcatggggagggccggcgccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagcactgagaaaggagaaatcccgagatgctgctcgctcccgccgg
ggaaaagaaaattttgagttctatgaattggccaagttgttgcctcttccggcagccatc
actagccagcttgacaaggcatccatcattcgacttaccattagctatctgaaaatgagg
gactttgctaaccaaggggaccctccgtggaacttgcgaatggaaggccctccacctaac
acatcagtaaaagggatacaaatgtggaaatctgaactctgcatgagaaagacaccatgt
gaagttataggtgcacaacgaaggagaagccccagtgcactggccattgaagtatttgaa
gcacatttgggaagtcacattttgcagtccctggatggctttgtatttgcactaaatcaa
gaaggaaaatttttgtacatttccgaaaccgtctccatctacctaggcctctcacaagtg
gagctgacaggcagtagcgtctttgactatgtccacccgggggaccacgtggagatggca
gagcagctgggcatgaagctcccgcccgggcggggtctcctctcgcagggcactgctgag
gacggagccagctctgcatcgtcctcctcccagtcggagacccctgagccagtggagtca
accagccccagtctgctaaccactgacaacacccttgagcgttcctttttcatccgaatg
aaatctactctgaccaaacgcggcgtgcacatcaaatcatcaggatataaggtgattcac
gtaacaggccggctacgactgagggtggccctatcccacgggaggaccgttcccagccaa
atcatgggtcttgtggttgtggctcacgccctgcctccccctacgatcaatgaagtcaga
attgactgccatatgttcgtcactcgagtaaatatggacctcaatatcatttactgtgaa
aataggatcagtgattatatggatctgacccctgtagacattgtagggaagagatgctac
cacttcatccacgctgaagatgtcgagggcatcaggcacagtcacttggaccgtaagggc
cagtgtgtgacgaagtactatcgctggatgcagaagaatggaggatatatttggatacaa
tctagtgccaccatagctattaatgccaagaacgcaaatgagaagaatatcatctgggtg
aattatcttcttagtaatcccgagtacaaggacacacccatggatattgcacagctcccc
cacctgccagagaaaacttcggaatcttcggagacgtccgactcggaatcagactctaaa
gatacctcaggtattacagaggacaacgagaattccaagtccgacgagaagggtaatcag
tccgagaacagcgaggacccggaccccgaccggaagaagtcgggcaacgcgtgcaacaac
gacatgaactgcaacgaggacggccacagctccagcaacccggacagccgcgacagcgac
gacagcttcgagcactcggactttgagaaccccaaggcgggcgaggacggcttcggcgcg
ctgggccccatgcagatcaaggtggagcgctacgtggagagcgagtcggacctgcggctg
cagaactgcgagtcgctcacgtccgacagcgccaaggactcggacagcgcgggcgaggcg
ggcgcgcaggcctccagcaagcaccagaagcgcaagaagaggcggaaacggcagaagggc
ggcagcgctagccgccggcgcctgtccagcgcgtcgagccccggcggcctggacgcgggc
ctcgtgnngcccccgcggctgctgtcgtcccccaacagtgcctcggtgctcaagatcaag
acggagatctcggaacccatcaacttcgacaacgacagcagcatctggaactacccgccc
aaccgggagatctccaggaacgagntcccctatagcatgaccaagccccccagctccgag
cacttcccgtccncgcagggtggcgggggcggcggggggctgcacgtggccatccccgac
tcggtcctcaccccgccgggcgccgacggcgccgccgccgcccgcaaaactcagttcggc
gcctcggccaatgcggccttggcccccgtcgcctccgacccgctctcgcccccgctctcg
gcgtccccgcgggacaagcacccgggggggcggcggggcggcggcggcggcggcgggggc
gggggtgggggcggcggcggcagcggccccagcacgtccaactccttgctgtacactggg
gacctggaggcgctgcagaggttgcaggcgggcaacgtcgtgctcccgctggtgcacagg
gtgacggggaccctggccgccaccagcacggccgcgcaaagggtctacaccaccggcacc
atccgctacgcgcccgcagaggtgaccctggccatgcagggcaacctgttgcccaacgcg
cacgctgttaacttcgtggacgttaacagccccggcttcggcctcgaccccaagacgccc
atggagatgctctaccaccacgtgcaccggctcaacatgtcaggacccttcggcggcgcc
gtaagcgccgccagcctgacgcagatgcccnngggcaacgtgttcaccacggccgaggga
ctcttctccacgctgcccttcccggtctacagcaacggcatccacgcggcacagactctg
gagcgcaaggaggactga
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