Zalophus californianus (California sea lion): 113910277
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Entry
113910277 CDS
T07874
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113910277 (CHD5)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113910277 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
113910277
NCBI-ProteinID:
XP_027428069
UniProt:
A0A6J2B848
LinkDB
All DBs
Position
4:complement(4051898..4111361)
Genome browser
AA seq
2007 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDD
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESD
FDSASIHSSSVRSEGSTALGKKSKRRRKKRRSRTSWVDDGDGYETDHQDYCEVCQQGGEI
ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDH
MEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHW
RWTEPPAPFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYH
TVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIH
RILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARL
PKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSW
AQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDF
YVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAI
LGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTP
ERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQM
QKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYD
GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT
GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH
RIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKF
GTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVI
HYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENV
DPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIG
SEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNA
IMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGL
SRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASP
AHLLPTPLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTSLDRVEGEDKHESADGKE
RLEETEKAPPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDGSDFRPDDTKVEEKEPLDT
QQNGDKEEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQISSCPR
DFPLLQCSFPAEEPCHLGTERETEKCHHMGDEAQPGWAGAQKCHLIIMPVSHPASHHPTP
GRTPWPPLPDNFLEEISFICTSFALSY
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatgggggcctcggaggctttgatgactatttc
cctgaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
tccaaagggaagcggaagaagaaagaggggagcaatgacgagctgtcggaaaatgaggag
gatctggaagagaagtcggagagtgagggcagtgactactcccctaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagccaagcgcaaaaggaaggatgatgacgac
gatgataatgatgacggctgtctgaaggagcccaagtcctcggggcagctgatggctgag
tggggcctggatgatgtggagtacctgttctcggaggcggactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccgctcattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgttctgggagccaagtggcgggagttcagcgccaacaaccct
ttcaaggggagctcggcagcggcagctgcagcggcggtggccgcggccgtggagaccgtc
accatcgcccctccactggctgtcagcccccagcaggcaccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagggtccaag
gatgcaaagaaaaagggcaaggggagaaaggtagccgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcggac
ttcgacagcgccagcatccacagctcgtccgtgcgctcggagggctccacagccctgggg
aagaagagcaagcggaggcgcaagaagaggaggagtaggacttcctgggttgacgatggt
gacggctacgagacggaccaccaggactactgtgaggtgtgccagcagggcggggagatc
atcctgtgtgacacctgcccgcgggcctaccacctcgtctgcctcgatccagagctggag
aaggctcccgagggcaagtggagctgtccccactgtgagaaggaggggatccagtgggag
ccaaaggacgacgaagacgacgaggaggagggcggctgcgaggaggaggaggacgaccac
atggagttctgccgcgtgtgcaaggacgggggcgaactgctctgctgcgacgcgtgcccc
tcctcctaccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatgg
ctctgcccgcgctgtacttgccccccgctgaagggcaaagtccagcggatcctacactgg
aggtggacagagccccccgcccccttcatggtggggttgccggggcccgacgtggagcct
ggtgtccccccacccaagcccctggagggcattccagagagagagttctttgtcaagtgg
gctgggctctcctactggcactgctcctgggtgaaggagcttcagctggagctataccac
acagtcatgtatcgcaactaccaaagaaagaatgacatggacgagccaccgccctttgac
tacggctctggcgatgaggatggcaagagcgagaaaaggaagaacaaggatcctctctac
gccaagatggaggaacgcttctaccgctacggcatcaagcccgagtggatgatgatccac
cgcatcctgaaccacagcttcgacaagaagggggatgtgcactacctgatcaagtggaaa
gacctgccctatgaccagtgcacctgggagattgacgacatcgacatcccctactatgac
aacctgaagcaggcctactggggccacagggagctgatgctgggtgaagatgctaggctg
cccaagaggctggtcaagaagggcaagaagctgaaggatgataaacaggagaagccacca
gacacacccattgtggatcccacggtcaagtttgacaagcagccttggtacatcgactcc
acgggcggcacgctgcacccataccagctggagggcctcaactggctgcgcttctcctgg
gcccagggcacagacactatcctggctgacgagatggggctgggcaagaccgtgcagacc
atcgtcttcctctactccctgtacaaggaggggcactccaaggggccctacctggtcagc
gcgcccctgtccaccatcatcaactgggagcgtgagtttgagatgtgggcacccgacttc
tatgtggtcacctacacgggggacaaagagagccgctccgtgatccgggagaatgagttt
tcttttgaggacaacgccattcggagtgggaagaaggtgttccgcatgaagaaagaagtg
cagatcaaatttcatgtcctgctcacctcctatgaactcatcaccatcgaccaggccatc
ctgggctccatcgagtgggcctgcctagtggtggacgaggcccaccggctcaagaacaac
cagtccaagttctttagggtcttgaacagctacaagatcgattacaagctgctgctgacg
gggactccgctgcagaacaacctagaggagctgttccatcttctcaacttcctgactcca
gagaggttcaacaatctggagggcttcctggaggagtttgccgatatctccaaggaagac
cagatcaagaagctacacgatctgctggggccacacatgctgaggcggctcaaggctgat
gtattcaagaacatgccggccaagaccgagctgatcgttcgtgtggagctgagccagatg
cagaagaagtactacaagttcatcctcacacggaacttcgaggcactcaactccaagggg
ggtgggaaccaggtgtcgctgctcaacatcatgatggatctgaagaagtgttgcaaccac
ccctacctcttccctgtggctgccgtggaggcccctgtcttgcccaatggctcctatgat
ggcagctccctggtcaagtcttcaggcaagctcatgcttctgcagaagatgctcaagaag
ctgcgggacgaagggcaccgtgtgctcatcttctcccagatgaccaagatgctggacctt
ctggaggacttcctggagtatgagggctacaagtatgagcggattgatggtggcatcact
gggggcctccgacaagaggcgatcgacagattcaatgcccctggggcgcagcagttctgc
ttccttctctcgacccgggcggggggcctgggcatcaacctggccacggcagacaccgtc
atcatctacgactcggactggaatccacacaatgacatccaggccttcagccgcgcccac
cgcattggacagaacaagaaggtgatgatctaccgcttcgtgactcgggcctcggtggag
gagcgcatcacacaggtggccaagcgcaagatgatgctcacccacctggtggtgcggccc
ggcctcggctccaagtccggctccatgacgaagcaggagctggacgacatcctcaagttc
ggcacagaggagctcttcaaggacgacgtggagggcatgatgtctcagggccagaggccg
gtcacgcccatccctgatgtccagtcctccaaagggggagccctagctgccagcgccaag
aagaagcatggcagcaccccgccaggcgacaacaaggacgtggaggacagcagtgtgatc
cactatgacgatgcggccatctccaagctgctggaccgaaaccaggacgccacggacgac
acggagctgcagaatatgaacgagtacctgagctccttcaaggtggcgcagtatgtggtg
cgcgaggaggacggcgtggaggaggtggagagggagatcatcaagcaggaggagaacgtg
gaccccgactactgggagaagctgctgcggcaccactacgagcagcagcaggaggacctg
gcccgcaatctgggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcc
caggaggaccaggagtggcaggacgagctctcggataaccagtccgaatattccatcggc
tccgaggatgaggacgaggactttgaggaaaggcccgaagggcagagtggacggcgacaa
tccaggaggcagctgaagagtgacagggacaagcccctgccacctctcctcgcccgtgtg
ggtggcaatatcgaggtgctgggcttcaacgcccggcagcggaaggcctttctgaacgcc
atcatgcgctggggcatgcccccccaggacgccttcaactcccactggctggtgcgggac
cttcgagggaagagcgagaaggaatttagagcctatgtgtccctcttcatgcggcacctg
tgtgagccgggggctgacggcgcggagaccttcgcggacggcgtgccccgtgagggcctc
tcgaggcagcacgtgcttacccgcatcggggtcatgtcactagttaggaagaaggttcag
gagtttgagcacgttaacgggaagtacagcaccccggacttgatccccgaggggcccgag
ggcaagaagccaagcgaggtcatctcctcggaccccaacacgccagtgcccgccagccct
gcccacctcctgccgaccccactgggcctgccagacaaaatggaagcccagctgggctac
atggatgagaaggagctgggggttcagaagccgaagaagcccccagaaatccaggccctg
ccaacttccctggacagggtggagggcgaggacaagcatgagagcgcagatggcaaggag
cggctggaggagaccgagaaggccccgccatccccagagcagctgccgaaagaagaagtg
cttcctgagaaggagaaaattctggacaagctggagctaagcttgattcacagcagaggg
gatggcagtgatttcaggccagatgacaccaaagtggaggagaaggagccccttgacaca
cagcaaaatggtgacaaagaggaagatgaggaagggaagaaggaggacaagaatgggaag
ttcaagttcatgttcaacattgcagacgggggcttcacagagctgcacacactgtggcag
aacgaggaacgtgctgctgtgtcctcggggaaaatctatgacatctggcaccggcgccat
gactactggctgctggccggcatcgtgacgcatggctacgcccgctggcaggacatccag
aatgacccaagatacatgatcctcaacgagcccttcaagtctgagatccacaagggtaac
tacttggagatgaagaacaagtttctggcccgcaggttcaagctgctggaacaggcactg
gtcatcgaggagcagctccggagggccgcgtaccttaacatgacccaggaccccaaccac
cccgccatggccctcaacgcccgcctggctgaggtggagtgcctggccgagagccaccag
cacctgtctaaggagtccctcgccgggaacaagccggccaatgccgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagtgacatgaaggcggatgtgacgcgcctgccctcc
atgctgtcccgcatccccccggtggctgcccgtctccagatgtcggagcgcagcatcctg
agccgcctgaccaaccgagccggtgaccccaccatccagcagatatctagctgcccccgc
gatttccctctgttgcagtgctcatttccagctgaggagccatgccatcttgggacggaa
agggaaactgaaaaatgccatcacatgggggacgaggcccagcctggctgggccggagcc
cagaagtgccacctcatcatcatgccagtgtcccacccagcgtcacaccaccccacaccg
ggacgtaccccttggccacctttgccggacaacttcttagaggagatttcatttatttgt
acatcttttgcactttcctattga
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integrated database retrieval system
