Zalophus californianus (California sea lion): 113910533
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Entry
113910533 CDS
T07874
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113910533 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113910533 (CHD8)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113910533 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
113910533
NCBI-ProteinID:
XP_027428609
UniProt:
A0A6J2B9Q4
LinkDB
All DBs
Position
6:73157674..73218360
Genome browser
AA seq
2590 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVEN
SSANDLVPPPDETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPAS
QPPPPPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPASSAPHTGGKIGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSR
HPELKRVTRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHTY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSVFNVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWIR
KYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFP
VVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHR
VLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQ
PGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARRE
KQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAM
CRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALC
QPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAP
APSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVAR
SRPTPQDYEMRVTPSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSS
STDESEDEKEEKLTADRSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRAS
EWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGPGNHLLDSPSLTPGEYGDSP
VPTPRSSSTASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMA
NGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAP
RRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRNG
RKGHHAETVFNRVLPGPITPDSSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSS
GLQSVSSLGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLR
APGYPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMPA
NSDSSEDADD
NT seq
7773 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggagaat
tcatcagcaaatgacctggtccccccaccagacgagacagcccccacagaacttcccaaa
gaatcaacagctccagctccagaatctttaactttgcatgattataccactcagcccgtc
agccaggagcagccagcccaacctgtcttacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcctccagtagtgctggagggcaaccacctcagtcagcccctaagattgtt
atccttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctggtggctggcacagccaatggtggaaaagtt
acttttaccaaagtgctaaccggcactccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcactctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgttctagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgacccaagccaagaatgctcaggggcagcccgccaaagtagtaacaatc
cagctgcaggtgcaacagccacagcagaaaatccagattgtaccacagccaccagcgtcg
cagccgccgccgccgccaccctcaacccagcctgtgactctgtcctctgtgcagcaggct
cagataatggggccaggacaaagcccaggacaaagactttcagtaccactcaaggtggtg
ctgcagccacaggctggctcttcccaaggggcttcttctgggctctccgtagttaaagtt
ctaagtgccagtgaagtggcagctctgtcttcaccagcaagctctgctcctcatactggg
ggcaagataggaatggaggaaaaccgcaggctggagcaccagaagaagcaagagaaagcc
aatcggattgtagcagaagctattgctagggcccgtgcccggggtgagcagaacatacct
cgagtcctaaatgaggatgagttgcccagtgttcggcctgaggaagaaggtgagaagaaa
cgcaggaagaagagcagtggggagagactcaaggaagaaaagccaaagaagagcaaaaca
tctggtacctccaaaactaagggcaagagtaagctgaacaccattacccctgtggtgggt
aaaaagagaaagcgtaatacctcatctgataattcagatgtagaagtcatgcctgcccaa
tcaccccgagaagatgaagaaagcagcattcagaaaagacggtcaaaccgccaagttaaa
cgaaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaagaa
gtggacgtaactggtccaataaaaactgagcctatcctccctgaaccagtgcaggaacca
gatggcgaaactttgccttccatgcagttctttgtggagaatcccagtgaagaagatgca
gccatagtagataaagtgctttccatgcggattgtgaagaaggagcttccttctggacaa
tatactgaggcagaagaattctttgtcaagtacaagaactactcctatctacactgtgaa
tgggctaccatctcccaactagagaaggataaaaggatccatcaaaaactaaagcgcttc
aaaaccaaaatggctcagatgagacatttcttccatgaggatgaagaacccttcaatcca
gactatgtagaggtggataggatattggatgagtctcacagtattgacaaagacaatggg
gagcctgtaatttactacctggtgaaatggtgctctctgccctatgaggatagtacgtgg
gagctgaaagaggatgttgatgagggcaagattcgagaatttaaacggatccagtcaagg
cacccagaactcaaaagagtgactcgtccacaggcaagtgcctggaagaagttggagctg
tcacatgaatataaaaacagaaaccagttacgggaatatcagttggaaggggtcaactgg
ctgctctttaattggtataacaggcaaaactgtatcctggctgatgagatgggactgggc
aaaactatccagtccattgccttcttgcaggaggtatataatgtgggcatccatggcccc
ttcctggtcattgccccactgtccacaattactaattgggagcgagaattcaatacatgg
acagaaatgaacactattgtataccatggcagtctggccagccgtcagatgatccagcaa
tatgaaatgtactgcaaagattcacgggggcgcctcatcccaggtgcatacaagtttgat
gccctgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgagattgaa
tggcgttgtgtcatcattgatgaggcccatcggctaaagaaccgtaattgcaagctgctt
gatagcctcaagcacatggacttggaacacaaagtgctactcacaggaacgccattgcaa
aatactgtggaggaactgttcagcttgcttcatttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggattttggggatcttaagacagaggaacaggttcaaaagcta
caggccattctcaagccaatgatgctaagaagactcaaagaggatgttgaaaaaaacctg
gcaccaaaacaggaaactatcattgaagtagagttgaccaacatccagaagaaatattac
cgggctattttggagaagaatttctccttcctgtccaagggggcaggtcatacgaacatg
cctaatctactcaatacgatgatggagttgcgcaaatgctgcaaccacccgtacctcatc
aatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatattatacctcat
gacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaagtta
cttccaaaacttaaagctggtggtcataaggttctgatcttctcccagatggtacgatgc
ctagatatcctagaggattatctaatccagaggaggtacctatatgagcgtattgatggg
cgagtcagaggtaaccttcggcaggcagctattgaccgcttcagcaagcctgactcagac
cgctttgtcttcctgctctgtacccgggctggtggacttggtattaatctcacagctgct
gatacctgcatcatctttgattcagactggaatccacaaaatgacctgcaggcccaggca
cggtgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtctcatcactcgtaat
tcttatgagagagagatgtttgataaggctagcctcaagttgggattggataaggctgtg
cttcagtccatgagtggtcgggatggcaacattaccggaatccagcagttctccaagaag
gagattgaagatcttttacgaaaaggggcatatgcagccataatggaagaagatgatgag
ggctccaagttttgtgaagaagacattgaccagatcttgttaagacgaaccacaaccatc
accatcgagtctgaaggaaagggttcaacctttgccaaggcaagctttgttgcttctgaa
aataggactgatatttctctggatgaccccaacttttggcagaagtgggccaaaaaggct
gacctggacatggatctgcttaatagcaagaataacttggtgattgacacacctagagta
cgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctctgat
ttggaaagtgaagatgatgagcggccacgctctcgccgacatgaccgacatcatacctat
gggcgcactgactgctttcgggtggaaaagcacctcttggtatatggttggggacggtgg
cgagatatcttgtctcatggacgcttcaagcgacgtatgactgaacgagatgtggagaca
atttgccgggccatccttgtatactgtcttctgcactatcgtggggatgaaaatatcaaa
ggcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcagaat
cattcagtcttcaatgtttcccctttcccaggtctgtctatccctgtgccccgtggacga
aaggggaaaaaagtaaagtcgcaaagcacttttgatatccataaggcagattggatccgg
aaatataatcctgatactctgttccaagatgagagttataagaagcatttaaaacatcag
tgtaacaaggtgctattgcgggtacgaatgctatattatctgaggcaggaggttattgga
gaccaggcagagaaggtgttagggggtgccattgccagtgagattgacatatggttccca
gtagtggatcagctggaggttccaacaacatggtgggacagtgaggctgacaagtccctg
ctcattggagtctttaagcatggctatgagaaatataatactatgagggcagacccagcc
ttatgcttcctggaaaaggctgggcgaccagatgacaaagccattgcagcagaacatcga
gtgttggataatttctctgacatagtagaaggggttgactttgataaggattgtgaagat
cctgaatataaaccactccagggtcccccgaaggaccaagatgatgagggtgatcccttg
atgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtaacccagcag
ccaggccatctcttctggcctccaggctctgctctgacagctaggcttcggcgcctagta
acagcttatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacgaggg
gaccggagacggcggcgttgtgaggcagccttcaagctaaaagaaattgcgcggcgggag
aagcagcagcgatggacaaggcgtgaacaaacggatttctatcgagtagtgtctaccttc
ggtgtggaatatgaccctgataccatgcagttccattgggatcgcttccgtacttttgcc
cgactcgacaaaaaaacagacgaaagccttaccaagtacttccatggctttgtggccatg
tgtcgccaagtgtgccgccttccgccagcagctggagatgagcccccggaccctaatctg
ttcattgagcccatcactgaggagagggcctcacggactctctaccgtattgaattgctt
cggcgcttacgggaacaagttttatgccatccccttctggaagatcggctggcattatgt
cagcctccaggtcctgaattgcccaaatggtgggagcctgttcggcatgatggggagctt
ctacgaggggcagcccgccatggggtgagccaaacagactgcaacatcatgcaggaccca
gacttctcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagcacca
gctccatccttgtcacgctgctctacgccactgctacaccagcagtatacctcgcgcact
gcctcaccactgcccctgcgcccagatgctcctgttgaaaagccacctgaggagacagct
gcccaggtccccagtctggagagtctgactttaaaactagagcatgaggtggtggccagg
agccgaccaaccccacaagactatgagatgcgagtaaccccctctgatactacccctctg
gtttcccggaatgttccaccagtcaaactggaggatgaggatgattcagactctgaactg
gacttgagtaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagctcc
agcactgatgagagtgaggacgagaaggaagaaaagctaactgctgaccggtcccgctca
aagctctatgatgaagagagtcttctgtccctcactatgtcccaagatggattcccaaat
gaagatggagaacagatgacccctgagcttctgctgctacaagaaagacaaagagcttct
gagtggcccaaggatcgtgtccttataaaccgtattgacctcgtctgccaggctgtactc
tcagggaagtggccttctagccgccggagccaggaaatggtaacaggaggaattttgggg
ccaggcaaccacttgctagacagtccctcattgactccaggagaatatggtgactctcca
gtccccacaccacgaagtagcagcacagcttccatggcagaggaggaagtgtccgcagtc
accacagcagcagctcagttcacaaaacttcgcagaggcatggatgaaaaggagtttaca
gttcagatcaaagatgaggaaggattgaagttaacattccagaagcacaagttgatggct
aatggagtaatgggagatggacatcctctgtttcataagaagaagggaaacagaaagaag
ctagtcgagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctggag
acccggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcccct
cgccgggctgaactggagatgtggttacagggtcatccagagttcgctgtcgatccccga
tttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaataat
aaggcagaattgaactgtttgggaatggaaccagtacagacagctaactctaggaatggg
agaaagggtcaccatgctgaaactgtgttcaaccgggttttgccagggcctattacgcca
gacagcagcaagaagcgggcccgtaggatgcgaccagacctttcaaagatgatggccctg
atgcagggtggaggcactgggtccctatctctgcataataccttccaacacagcagtagt
ggcctgcagtctgtgtcatccctgggtcacagcagtgccacttctgcatctttgcctttt
atgccgtttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatgctt
catcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctgaga
gcccctggctacccttcttcaccagccactaccacctctggtactgccttgaggttgcca
ccactgcagcctgaggaggatgaggacgatgaggatgaagatgatgatgatgatttatct
cagggctatgatagctcagaaagggacttctcactcattgatgatcctatgatgccagcc
aactcagactcaagtgaagatgctgatgactga
DBGET
integrated database retrieval system
