Zalophus californianus (California sea lion): 113910920
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Entry
113910920 CDS
T07874
Symbol
LRRC7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zca04990
]
113910920 (LRRC7)
Domain-containing proteins not elsewhere classified [BR:
zca04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
113910920 (LRRC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
LRR_13
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
113910920
NCBI-ProteinID:
XP_027428783
UniProt:
A0A6J2BG61
LinkDB
All DBs
Position
4:56722896..57661937
Genome browser
AA seq
1612 aa
AA seq
DB search
MMGSKLPQGHLFLSHRVENMMKQDHLIYLQVIRMENLIRGRNPPQYQRSPCKEVRAALRK
RPEEELQCLEMTTKRKIIGRLVPCRCFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEE
LYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPEN
IKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRE
NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK
MLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM
LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM
SLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIPLQ
TEAHPETKQRVLTNYMFPQQPRGDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEEKKEDD
ENAGKVKDHSCQAPWERGQRGITLQPARLSGDCCTPWARCDQQIQDMPVPQNDPQLAWGC
ISGLQQERSMCTPLPVAAQSTTLPSLSGRQVEINLKRYPTPYPEDLKNMVKSVQNLVGKP
SHGVRVENSNPTANTEQTVKEKYEHKWPVAPKEITVEDSFVHPANEMRIGELHPSLAETP
LYPPKLVLLGKDKKESTDESEVDKTHCLNNSVSSGTYSDYSPSQASSGSSNTRVKVGSLQ
TTAKDAVHNSLWGNRISQSFPQPLDSKPLLSQREAVPPGNVPQRPDRLPMSDAFTDNWPD
GSHYDNTGFVAEETAGENANNNPLLSSKSRSTSSHGRRPLLRQDRIVGVPLELEQSTHRH
TPETEVPPSNPWQNWTRTPSPFEDRTAFPSKLETTPTTSPLPERKEHIKESAEIPSPFSP
GVPWEYHDSNPNRSLSNVFSQIHCRPESSKGVISISKSTERLSPLMKDIKSNKFKKSQSI
DEIDIGTYKVYNIPLENYASGSDHLGSHERPDKMLGPEHGMSSMSRSQSVPMLDDEMLTY
GSSKGPQQQKASMTKKVYQFDQSFNPQGAVEVKAEKRIPPPFQHNSEYVQQPGKNISKDL
VSPRAYRGYPPMEQMFSFSQPSVNEDAVVNAQFASQGARTGFLRRADSLASSTEMAMFRR
VSEPHELPPGDRYGRPPYRGGLDRQSSVSVTESQFLKRNGRYEDEHPSYQEVKAQAGSFP
VKNLTQRRPLSARSYSTESYGASQTRPVSARPTMAALLEKLPSDYNLGNYGDKPSDNSDI
KPRPAPVRGEESCGKMPADWRQQLLRHIEARRLDRNAAYKHNTVNLGMLPYGGISAMHAG
RSMTLNLQTKSKFDLQELPLQKTPSQQSNILDNGQEDVSPSGQWNPYPLGRRDVPPDTIT
KKAGSHIQTLMGSQSLQHRSREQQGYEGNINKVTIQQFQSPLPIQIPSSQATRGPQPGRC
LIQTKGQRSMDGYPEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPA
SNLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQLSDEKCLSRA
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagtaaattacctcagggacatctcttcttaagtcacagggtagaaaatatg
atgaaacaagaccatcttatctatttacaagtaataaggatggagaacctaataagggga
aggaatcccccacaatatcagagaagtccttgtaaagaagttcgtgcagcacttcggaaa
aggcctgaagaagagttgcagtgcctggagatgaccaccaagcggaaaatcatcggccga
ctggtgccgtgccgatgtttccgaggtgaagaagaaatcatctcagttttagactactcc
cactgcagtcttcagcaggtgccgaaggaggtctttaacttcgagcggacattagaggag
ctttatctagatgccaatcaaatcgaagagctacccaagcaattgttcaactgtcaagct
ctaagaaaactaagtattcctgataatgatctttcaaatctgccaaccactattgctagt
ttagttaatcttaaagaactcgacatcagtaaaaatggtgtacaagaatttccagaaaac
attaagtgctgtaagtgtttaacaattattgaagccagtgtcaatcccatttctaaactc
cctgatggcttcacgcagcttctaaatctgacccagctctacctgaatgacgcctttctt
gaatttcttccagctaattttggaagacttgtcaaattgcggatcttggagttaagagaa
aatcatttgaaaactctaccaaagtcaatgcacaaactggcccagttggaaagacttgac
ctaggcaataatgaattcagtgagctgcctgaagttctggatcaaatacaaaatttaagg
gagctgtggatggataataatgcattacaagtgctacctgggtctatagggaagttaaag
atgttggtatacctggatatgtcaaaaaacagaatagaaacggttgacttggacatttct
ggatgtgaagcccttgaggacctcttactgtcatccaatatgttgcaacagttgcctgac
tctataggactgttgaaaaaactaactactctaaaagtagatgacaatcaacttacaatg
ctacccaacacaatcggaaatttatctttattggaagaatttgactgcagctgtaatgaa
ctggagtctctaccttctactattggctaccttcatagtcttcgaacattagcagtcgat
gagaatttccttccagaattaccccgagaaattggaagctgtaagaatgtaacagttatg
tctctacgttccaataaactggaatttcttcctgaagagattggacagatgcagaagcta
agagtcttaaatttgagtgacaacagattgaagaatttaccattctcatttaccaaactt
aaagagcttgcagctttgtggctttctgacaatcagtccaaagcccttatccctttacaa
actgaagcccatccagaaacaaagcaaagagtattgactaactacatgtttccccagcaa
cctcgtggtgatgaagatttccagtcagacagtgacagctttaaccctaccctgtgggaa
gagcagagacaacaacgcatgactgttgcctttgaatttgaagaaaaaaaggaagatgac
gaaaatgctgggaaagttaaggatcactcctgccaagccccctgggaaaggggccagcgt
gggattactctccaacctgccagactgtctggcgattgctgcacaccatgggccaggtgt
gatcagcagatccaagatatgcccgtcccccagaatgacccacagctggcatggggttgt
ataagtggcctccagcaggaaaggagcatgtgtactccattgccagttgcagcacaatcc
accactcttccctctctaagtggcagacaggttgaaataaacctaaaacgatatccaact
ccttatccagaggatttaaagaatatggtaaaatctgttcaaaatctggtgggtaagcca
agccatggagtgcgtgttgagaattcaaatccaactgctaacacggagcaaactgtgaaa
gaaaaatatgaacacaagtggcctgtagccccaaaggagattacagtggaggattctttt
gttcatccagctaatgaaatgaggattggggaacttcacccttcattagctgagacccct
ctgtacccacccaaacttgttctgctagggaaggacaaaaaagaatcaactgatgagtct
gaagttgacaaaactcactgtctgaataacagtgtttcctcaggcacttactcagactac
tcaccttcccaggcttcctcaggatcctctaacacccgggttaaagtggggtccttgcag
acaacagctaaagatgcagtacataattctttatggggtaacaggatttcgcaatctttc
ccacagcctctcgattcaaagccattactcagccagcgggaggctgttcccccagggaat
gtaccgcagcgtccagaccggctgccaatgagtgacgccttcacggacaactggcctgat
ggttcacattatgataacacagggtttgttgcagaggagaccgcaggcgagaatgccaac
aacaatcctctcttaagttcaaaatctagaagcacatcttctcatggacgcaggcctttg
cttaggcaggataggattgttggtgttcccctggaactcgagcagtctacacacagacac
acaccagaaacagaagtgcctccttccaatccctggcagaattggaccagaacccctagt
ccttttgaagacaggaccgctttcccttccaaattagagacaacccccaccaccagccca
ttgcctgaaaggaaagaacatataaaagaatctgctgaaatacctagtcctttttctcca
ggagtaccatgggagtatcacgattccaatcccaacaggagtcttagcaatgtcttttct
cagatccactgccgcccagaatcttctaaaggtgttatttccattagcaaaagcacagag
aggctttccccactcatgaaagatatcaagtccaataaattcaaaaagtcccagagtatc
gatgagattgacattggtacgtacaaggtgtataacataccgttagaaaactatgcttct
gggagtgatcacttaggaagccatgaacggccagataaaatgttgggaccagagcatggt
atgtccagtatgtctcgaagccagtcggtcccaatgctggatgacgagatgctcacgtat
ggaagtagtaaagggccacagcaacaaaaagcttccatgaccaaaaaagtctatcagttt
gaccaaagcttcaatccccaaggagcagtggaagttaaagccgaaaagaggataccgccc
ccgtttcaacacaattctgagtacgtgcaacagcccggcaaaaacatcagcaaggatttg
gttagtcccagagcttacagaggatacccaccgatggagcaaatgttctcattttctcag
ccatccgttaatgaggatgctgtggtgaatgcccagttcgcaagccaaggtgccaggacg
ggcttcttgagaagagccgactccctggcgagctccacagagatggccatgtttagaagg
gtcagtgaacctcatgagctgcctccgggtgataggtacggcagacctccgtataggggc
ggtctggatcgccaaagcagcgtttcagtgactgagtcccagttcctgaaaaggaatggc
aggtacgaagatgaacacccttcatatcaagaagtgaaagctcaggcgggaagttttcca
gttaaaaaccttacgcagaggaggccattgtctgcaagaagctacagtacagagagttac
ggtgcctcccaaaccaggccagtttcagctaggcctactatggcagctcttttggaaaaa
ctgccatctgactataacttgggtaactatggtgacaagccatcagataacagtgatata
aagccgaggcccgcccctgtgaggggagaggagagctgtgggaaaatgcctgcagactgg
agacagcagctgcttagacatatagaagctagaaggttagacaggaatgctgcttacaaa
cacaacacagttaaccttggcatgctgccctatggaggtatttcagcaatgcatgcaggc
agaagcatgactttaaacttgcagactaagtctaaatttgatctacaagaactacctctt
cagaaaaccccgtcccagcaaagcaacattttagacaatggacaagaagatgtatctcct
agtggccaatggaatccttatcctcttgggaggcgggatgtacctccggacaccattact
aaaaaggcaggcagccacatccagactctgatggggtcccaaagccttcagcatcggagc
cgggaacagcagggatatgaggggaatataaacaaagtgaccatccagcaatttcagtca
ccattgcctattcagatcccctcttcacaggccacccggggacctcagcctggacggtgc
ttaattcaaactaaagggcaaaggagtatggatggctatccggagcagttttgtgtgaga
atagaaaagaatcctggccttggatttagtatcagtggtggaattagcggacaaggaaat
ccatttaaaccttctgacaagggtatctttgttactagggttcagcctgatggaccagca
tccaacctgctgcagcctggtgataagatccttcaggcaaatggacatagttttgtacat
atggaacatgaaaaagctgtattactactgaagagtttccagaacacagtagacctagtt
attcaactttctgatgagaaatgtctttcaagagcctaa
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integrated database retrieval system
