Zalophus californianus (California sea lion): 113910924
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Entry
113910924 CDS
T07874
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04340
Hedgehog signaling pathway
zca04360
Axon guidance
zca05200
Pathways in cancer
zca05205
Proteoglycans in cancer
zca05217
Basal cell carcinoma
zca05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113910924 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
113910924 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113910924 (SHH)
05205 Proteoglycans in cancer
113910924 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
113910924 (SHH)
05217 Basal cell carcinoma
113910924 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
113910924 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zca00536
]
113910924 (SHH)
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C46: hedgehog family
113910924 (SHH)
Glycosaminoglycan binding proteins [BR:
zca00536
]
Heparan sulfate / Heparin
Morphogens
113910924 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hint
HH_signal
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
113910924
NCBI-ProteinID:
XP_027428785
UniProt:
A0A6J2B9W7
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All DBs
Position
12:complement(104455647..104465137)
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AA seq
373 aa
AA seq
DB search
MEKRNVAVQIKNRCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDI
TTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSATVHLE
QGGTKLVKDLRPGDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTA
AHLLFVAPHNDSAAGEPEAPSGAGPPPGGAPGRRALFASRVRPGQRVYVVAERGGDRRLL
PAAVHSVTLREEATGAYAPLTAQGTILINRVLASCYAVIEEHGWAHRAFAPFRLAHALLA
VLAPARTDRGRDGDGGGGGHLPPPAPGAPDAPGAADAPGAVGIHWYSQLLYQIGTWLLDS
EALHPLGMAVKSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaggaatgtggctgtccagataaagaataggtgtaaggacaagctgaatgcc
ttggccatctcggtgatgaaccagtggcccggtgtgaagctgcgggtgaccgagggctgg
gacgaagatggccaccactcagaggagtcgctgcactacgagggccgtgcggtggacatc
accacgtcagaccgcgaccggagcaagtatggcatgctggcacgcctggccgtggaagct
ggcttcgactgggtgtactacgagtccaaagcgcacatccactgctccgtgaaagcagag
aattcggtggcggccaagtccggcggctgcttcccgggctcggccaccgtgcacctggag
cagggcggcaccaagctggtgaaagacctgcgtcccggggaccgcgtgctggcggccgac
gaccagggccgactgctctacagcgacttcctcaccttcctggaccgcgacgatggtgcc
aagaaagtcttctacgtgatcgagacgcgggagccgcgcgagcgcttgctgctcaccgcc
gcgcacctgctgttcgtcgcgccgcacaacgactcggcggccggggagcccgaggcgccg
tcgggcgcggggccgccaccggggggcgcgccagggcgccgggcgctcttcgccagccgc
gtgcgcccgggccagcgcgtgtacgtggtggccgagcgcggcggggatcgtcggctcttg
ccggccgccgtgcacagcgtgacgctgcgtgaggaggcgacgggcgcctacgcgccgctc
acggcgcagggcaccatcctcatcaaccgggtgctggcgtcgtgctacgcggtcatcgag
gagcacggctgggcgcatcgggccttcgcgcccttccgcctggcgcacgcgctcctggcc
gtgctggcgcccgcgcgcacggaccgcggcagggacggcgacggcgggggcggcggccac
ctgcccccgcccgcgccaggggcgcctgatgcgccgggtgcggccgacgcgccaggtgcc
gtgggcatccactggtactcgcagctgctctaccaaataggcacctggctgttggacagc
gaggccctgcacccgctgggcatggcggtcaagtctagctga
DBGET
integrated database retrieval system
