Zalophus californianus (California sea lion): 113911161
Help
Entry
113911161 CDS
T07874
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04140
Autophagy - animal
zca04148
Efferocytosis
zca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113911161 (VPS41)
04148 Efferocytosis
113911161 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113911161 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113911161 (VPS41)
Membrane trafficking [BR:
zca04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
113911161 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_HPS5
WD40_WDHD1_1st
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_RIG_2nd
TPR_PEP5_VPS11
zf-RING_5
zf_RING_Vps8
Frtz
RIG-I_C
Beta-prop_IFT140_2nd
CofB_pilin_dom
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113911161
NCBI-ProteinID:
XP_027429149
UniProt:
A0A6J2BB64
LinkDB
All DBs
Position
12:14419955..14626896
Genome browser
AA seq
854 aa
AA seq
DB search
MAEAEEQETESLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKRDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDAAKPFSVLVFHCRHMFHKECLPGPSTNPPAQFCGICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaagagcaggaaaccgagtctcttgaagaatctacagatgagtctgag
gaagaagaaagtgaagaggagcccaaactgaagtatgaaaggctttccaatggggtaact
gaaatccttcagaaggatgcagctagctgcatgacagtccacgacaagtttttggcactg
ggcacccattatggcaaagtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcctggatgagagtggagagcacatgggc
gtgtgttcagaggatggcaaggtgcaggtatttggactgtattctggagaagagtttcat
gagacttttgactgccccattaaaatcattgccgtgcacccacatttcgtgagatccagc
tgcaagcagtttgtgactggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttctgttctgcacgaaggggaagggaacataaggagcgtcaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcacctccaag
cagagaatcaccaatgtgccccgggatgacataagtcttcgcccagatatgtatccgtgc
agcctctgctggaaggacagcgtgacgctgattattggctgggggacttctgtcaagatc
tgctcagtgaaggagcggcatgctagtgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggacttgcacctctctgtgatcag
cttgttgttctttcctatgtgaaggaggtgtcggaaaaaacggaaagagaatactgtgcc
aggccgagactggatatcatccagccgctctctgaaacctgtgaagagatctcttccgac
gctctgaccgtgagaggctttcaggagaatgagtgtagagattatcatttagagtactct
gaaggggaatcgctcttttacatcgtgagtccaagagatgttgtggtagccaaggaacga
gaccaagatgaccacattgactggctccttgaaaagaagaaatacgaggaagctctgatg
gcagctgaaatcagccagaagaacattaaaagacataagattctagatattggcttggca
tatataaaccacctggtggagaaaggagagtatgacatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttacaaatttaaagaaattgga
cagcttaaggctattagtccttacttgccaagaggagatccagttctgaaaccactcatc
tatgaaatgatcttacatgagtttttggaaagtgattatgagggttttgccactctgatc
cgagaatggcctggagatctgtacaacaattcagtaatcgttcaagcagttcgggatcac
ctgaagagagatagtcagaatagaaccttactcaaaaccctggcagaactgtacacctat
gacaaaaactatggtaatgctctggaaatatacttaacattaagacacaaggatgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgtcgacatgcttttggacaacgaagacaaaatttcaatt
aaaaaggtagtggaagaactagaagacagaccagagttgcagcacgtgtatttgcataag
cttttcaagagagaccatcataaggggcagcgctaccatgaaaaacagatcagcctttat
gctgaatatgatcgaccaaacttacttccgtttctccgagatagtacccactgccccctt
gaaaaggctcttgagatctgtcaacagagaaacttcgtagaagagacggtttatcttctg
agccgaatgggtaatagccgaagtgccctgaagatgatcatggaggaattacatgatgtt
gataaagcaattgaatttgccaaggagcaagatgatggagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttattactggcttgttaaacaacattggcacgcat
gtggacccaattcttctgattcaccgtattaaggaagggatggagatccccaatttgaga
gattccttggttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgc
aagaagattctcgtggcagactctttgtctttactgaagaaaatgcaccgaactcaaatg
aaaggcgttctggtcgatgaggagaacatctgtgaatcgtgcctttcccctattcttcca
tcagatgccgccaagcccttcagcgtgctggtcttccactgccgccacatgttccacaag
gagtgcctgcctgggcccagcacgaaccctcctgcgcagttctgcggcatctgcagcgcc
aagcaccgcgggccaggaagcgccattttggagatgaagaagtag
DBGET
integrated database retrieval system
