Zalophus californianus (California sea lion): 113911212
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Entry
113911212 CDS
T07874
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113911212 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zca01007
]
113911212 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113911212 (GARS1)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113911212 (GARS1)
Enzymes [BR:
zca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
113911212 (GARS1)
Amino acid related enzymes [BR:
zca01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113911212 (GARS1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113911212 (GARS1)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
113911212 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
DUF5915
Motif
Other DBs
NCBI-GeneID:
113911212
NCBI-ProteinID:
XP_027429308
UniProt:
A0A6J2BHK4
LinkDB
All DBs
Position
12:60835516..60881353
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AA seq
739 aa
AA seq
DB search
MHSLRSALLRTARAALLLSLPSRLPARPPLPPCRPLSARARAQTSFPAAASRSSMDGSGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKLLKEPKTVSVVQFEPNKGAIGKAYKKDAKLVLEYLAVCDECYITEMEKLLNEKGEF
TIETEGKTFQLTKDMVNVKRFQKTLHVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFIPFVKELSEALTRNGVSHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSVVCDLANGSITWADVE
ARYPVFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcactctctgcgctcggcgctgcttagaaccgcccgcgccgcgctgctgctgtcgctg
ccctcccggctcccggcccggcctccgctcccgccctgccggcccctcagcgcgcgcgcc
cgcgcccagacctcattccccgccgccgcctcccggagcagcatggacggctccggggct
gaggaggtgctagcccctctcaggcttgccgtgcgccagcagggagatcttgttcgaaaa
ctgaaagaagataaagcaccccaagtagatgtagacaaagctgtagctgagctcaaagcc
cggaagagagttctggaagcaaaggagctagcattacaacccaaagacgacattgtagac
agagcaaaaatggaagataccctgaagaggaggtttttctacgatcaagcttttgctatt
tatggaggtgttagtggtctgtatgattttgggccagttggatgtgctttgaagaataat
attattcagacctggaggcagcactttatccaagaggaacagatcctggagattgattgt
accatgctcacccctgagccagttttaaagacctctggccacgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagagtgttttcgtgctgaccatctattaaaagct
catttacagaaattgatgtctgataagaagtgttctgctgagaagaaatcagagatggaa
agtgtcttggctcagcttgataactatggacagcaggaacttggagatctttttgtgaac
tataatgtaaaatcccccattactggaaatgatctctcccctccagtatcttttaactta
atgttcaagaccttcattgggcctggaggaaacatgcctgggtacttgagaccagaaacc
gcacaggggattttcctgaatttcaagagacttttggaattcaaccaaggaaagttgcct
tttgctgctgcccagatcggaaattcttttagaaatgagatctcccctcgatctggactg
atcagagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaag
gaccatcccaagtttcagaatgtggcagacctccacctttatttgtattcagcaaaagcc
caggtcagcggacagtctgctcgaaaaatgcgcctaggagatgctgttgaacagggtgtg
attaacaactcagtattaggctacttcattggccgcatctacctctatctcacgaaggtt
ggagtatctccagataaactccgcttccgccagcatatggagaacgagatggcccactac
gcctgtgactgttgggatgccgaatctaaaacatcctatggctggattgagattgtcgga
tgtgctgatcgttcctgttacgacctttcttgtcatgctcgagccaccaaagtcccactt
gtagctgagaaacttctgaaagagcccaaaacagtcagtgttgttcagtttgaacccaat
aagggagcaattggtaaggcatataagaaggatgcaaagctggtgctggagtacctggct
gtttgtgatgagtgttacattacagaaatggagaaactactgaatgaaaaaggggaattc
actattgaaactgaggggaaaacatttcagttaacaaaagacatggtcaacgtgaagaga
ttccagaaaacactacatgtggaagaagttgttccgaatgtaattgagccctcctttggc
ctgggcaggatcatgtatacggtatttgaacatacattccatgtacgtgagggagatgag
cagagaacgttcttcagtttccctgctgtagtagctccattcaaatgttcggtcctgcca
ctgagccaaaaccaggagttcatcccatttgtcaaggaattatcggaagccctgaccagg
aacggcgtctctcacaaagtagacgactcctctggatctattggaagacgctacgccagg
actgatgagattggcgtggctttcggcatcaccattgacttcgatacagtgaacaagacc
cctcacacggcaactctgcgggaccgagactccatgcggcagattagagcagaggtctct
gaactgcccagtgtagtctgcgatctggccaatggcagcatcacgtgggccgatgtggag
gccaggtatcctgtctttgaagggcaagagactggtaaaaaagagacaatcgaggaatga
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