Zalophus californianus (California sea lion): 113911439
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Entry
113911439 CDS
T07874
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04390
Hippo signaling pathway
zca04530
Tight junction
zca05165
Human papillomavirus infection
zca05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
113911439 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113911439 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113911439 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113911439 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
113911439
NCBI-ProteinID:
XP_027429848
UniProt:
A0A6J2BJ58
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All DBs
Position
4:complement(190577400..190595857)
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AA seq
1634 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPRSLGKLTKLTNLNADRNRLEVLPPEIGGCVALSVLSLRDNRLAALPPELAHTAEL
HVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
PPGLEAPGRQGSPSESWSDAPASRVSVIQFLEVPTCGDDAEGAAAEKRGLQRRATPHPSE
LKVMKRGVEERRGEAHSRRPESRPPSPLEEDKRLSTESGMSEDSQPSAGTASQGEPEGPL
TGTQGLSQQEAAPNAQEEAADGTYEEPTVRFAEDTLPLPPGEDGEGEQGQLAAAWPPPGG
RQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGTQPDGEGPVGPSAWHNGPHTPWAPRAE
EEAEEEEEEEEAAAAEEAEEAAAVVVSAPSIKGVSFDQANNLLIEPARIEEEELTLTIVR
QTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALHSAEH
HQAVEALRGAGTTVQMRLWRERMVEPENAVTVTPLRPEDDYSPREWRGAGLCLPLPSPES
AGPPRQRHVACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAQRAGTLQVGD
RVLSINGVDMTEARHDHAVSLLTAASPTIALLLEREAGGPLPPSPLPHSPPPPIAATTAV
VTATPGESGPLRLASSLLAAALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGIQEP
GVFISKVLPRGLAARSGLRVGDRILAVNGQDIREATHQEAVSALLRPCLELVLVVRRDPP
PPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVG
LRLLEVNQQSLLGLTHGEAVRMLRGVGDTLTVLVCDGFDTSIAVPAEVSPGVIANPFAAG
LGRRNSLESISSIDRELSPEGSGKEKELPGQTPQWGLEAVGRSSESLKLDYRTLAAMPSA
GGTQRVPPGATGGKMAEGPCSPSCQQPPSPPSPDALPTNVKQAYRTFAAVPGPHPPQDPP
AQPPTPGPTASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQ
QKRAQLMREAEDSGLTLDLDGEAPEEEEQPEPPAWAGPAAGLSPSSPQPLGGGGAPVRTA
KAERRHQERLRVQSPELSAPDRALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLS
KSQEGRSRRGPLERLAEAPSPAPTPSPTPVEDLGPQTSTSPGRLALSGRKFDYRVFAALP
SSRPVYDMQSPDFAEELRSLEPSPSPGPQEEDGEVAMVLLGRPSPGAGGAEDVALCSSRR
PMRPGRRGLGPVPS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgcagcctggaggag
ctgctcctcgacgccaaccagctgcgcgagctgcccaagcccttctttcggcttttgaac
ctgcgcaagctgggcctgagtgacaacgagatccagcggttgccccccgaggtggccaat
tttatgcagctggtggagctggacgtgtcccggaacgacatccccgagatcccggagagc
atcaagttctgcaaggctctggagatcgcagacttcagcgggaaccccttgtctaggctc
cccgaaggcttcactcagctgcgcagcctggctcacctggcactgaatgatgtgtctctg
caggcgctgcccggggacgtgggcaacctcgccaacctggtgaccctagagctccgggag
aacctgctcaagtccttgcctgcgtctctgtccttcctggtcaagctggaacagctggat
ctgggaggcaatgagctcgaagtactgcctgacaccctcggggcgctgcccaacctccgg
gagctgtggttggaccgcaaccagttgtcagcactgcccccggagctggggaacctgcga
cgtttggtatgcctggacgtgtcggaaaaccggctggaggaattgcccgcggagctcggt
gggctcctgctgctcaccgacctgctgctatcccagaacttgctgcagcggcttcctgat
ggcatcggtcagctgaagcagctgtccatcctgaaggtggaccagaaccggctctgtgag
gtgaccgaggccatcggcgactgtgagaacctctctgagctaatcctcacggagaacctg
ctgacggctctgccccgctctctggggaagctgaccaagctgaccaacctcaacgcggac
cggaaccgtctagaggtgctgccaccggagattggaggctgtgtggcgctcagcgttctc
tccttgcgggacaaccgcctggccgccctgccaccggagctcgcccacacggctgagtta
catgtgctggacgtggccgggaaccggctgcagagtctgccgtttgcgctcacccacctc
aacctcaaggccctgtggttggctgagaaccaggcacagccgatgctccggttccagacc
gaggacgatgctcagaccggcgagaaggtgctcacctgctacctgttgcctcagcagccc
ccgcccggtcttgaggccccggggcggcagggcagcccttcggagagctggagtgacgcc
ccggccagccgcgtcagcgtcatccagtttctggaggtccccacgtgcggcgacgatgct
gagggagccgctgctgagaagcggggcctgcagcgtcgggccacacctcaccccagcgag
ctgaaggtgatgaagaggggtgtcgaggagcgccgaggcgaagcccactcccgcaggccg
gagtccaggccgccctcaccgctggaggaggacaagaggctgagcaccgagtctggaatg
agtgaggactcgcagccgtccgctggtacagcctcccagggtgaacccgaggggccgctg
accggaacacaggggctgagccagcaggaagccgcccccaacgcccaggaggaggctgcg
gacgggacgtacgaggagcccacggtgcgcttcgcggaggacacgctgccgctgcccccc
ggggaggacggcgagggcgagcaggggcagctcgcggcggcctggcccccgccgggcggg
aggcagcgtctcattcgcaaagacacccctcactacaagaagcacttcaagatttccaag
ctgccacagcccgaggccgtcgtggccttgctgcaggggacgcagccggatggtgagggc
cccgtggggccctcggcctggcacaacggcccccacacgccctgggctcctcgggccgag
gaggaggccgaggaggaggaggaggaggaggaggcggcggcggccgaggaggccgaggag
gcggcggcggtcgtggtgtccgcgccctccatcaagggggtgtcgtttgaccaggccaat
aacctgctgatagaacccgcacgcattgaggaggaagagctgacactcaccatcgtgcgg
cagacggggggcctgggtatcagcatcgctggtggcaagggctctacgccctacaagggg
gatgacgagggcatattcatctctcgggtgtccgaggagggccctgcagcccgggcgggc
gtccgagtgggtgacaagctcctcgaggtgaacggcgtggctctacacagtgccgagcac
caccaggctgtggaggcgctgcggggggcaggcaccaccgtgcagatgcgcctgtggcgg
gagcgcatggtagagccggagaatgcggtcaccgtcacgcctctgcggcccgaggacgac
tacagccctcgggaatggcggggagctggcctgtgcctgcccctgccctcaccggagtcc
gccgggcccccccgccagcgccacgtggcctgccttgtgcgcagcgagaaggggctgggc
ttcagcatcgccggcgggaaaggctccacgccttaccgggctggcgatgggggcatcttc
atatcccgcatcgcggaggggggtgccgcccagcgggcgggcactctgcaggttggcgac
cgtgtcctctcgatcaacggggtggacatgactgaggccaggcacgaccacgccgtctcc
ctgctgaccgccgcttcccccaccatcgccctactgctggagcgggaggccggggggccc
cttccccccagccctctgccacactcccccccaccccccattgcagccaccaccgccgtg
gtcactgccacccctggggaatctgggccactgaggctggcctctagcctgctggctgct
gccttggaggggccgtacccagtggaggagatctgcctgccgagagccgggggcccactg
ggactcagcattgttgggggctccgatcactccagccatccgtttggtatccaggagcct
ggcgtgtttatctccaaggtgctcccgcggggcctggccgcacgtagtggccttcgggtt
ggggaccgcatcctggcagtgaacgggcaggacattcgggaggccacgcaccaggaggcg
gtcagtgccctgcttcggccctgcctggagctggtcttggtcgtgaggagggacccgccc
cccccaggcatgcgggaactctgtatccagaaggcccctggggagaagctgggcatcagc
attcgaggaggtgccaagggccatgcggggaacccctgtgatcccacagatgagggcatc
ttcatttccaaggtgagccccacgggagcggccgggcgcgatggccggctgcgggtaggg
ctgcggctgctggaggtgaaccagcagagcctgctcggcctgacacacggcgaggccgtg
cggatgctgcgcggcgtcggcgacaccctcaccgtgcttgtgtgcgacggcttcgacacc
agcatcgctgtccctgctgaggtgtccccgggcgtcattgccaacccctttgcggcaggc
ctcggccgccggaacagcctggagagcatctcctccatcgaccgggagctgagccccgag
ggctctggcaaggagaaggagctgccgggacagaccccgcagtggggactagaggccgtg
ggccggagctcggagagcctcaagctggactaccgcactctagccgccatgcccagcgct
gggggcacgcagagggtaccgcctggagcgacaggagggaagatggctgagggcccctgc
tcccccagctgccagcagcccccatccccaccctcccccgacgcactgcccaccaacgtg
aagcaggcctacaggacctttgctgctgtacccggcccgcacccaccgcaggacccccct
gcccagccccccacccccggacccacggcctccccggagcagctgtctttccgggagcgg
cagaagtactttgaactggaggtgcgggtgccccaggccgaggggccccccaagcgcgtg
tcactggtgggtgccgacgacctgcggaagatgcaagaggaggaagcccgaaagctgcag
cagaagagggcgcagctgatgcgggaggcggaggacagcgggctcaccctggacctggac
ggggaggcccccgaggaggaggagcaacccgagcccccggcctgggccggccctgcggca
gggctcagcccctcgtccccccagcccctcggaggcggcggcgccccggtgcgcacagcc
aaagccgaaaggcgccatcaggagcggctccgcgttcagagcccggagttgtcggcgcct
gaccgggctctgtcccccgccgagcggcgcgccctggaggccgagaagcgcgcgctgtgg
agggcagccaggatgaagtctctggagcaggacgccctccgtgcgcagatggtcctcagc
aagtcccaggagggccggagcaggcgcgggcccctggagcggctggccgaggccccctcg
cccgcgcccaccccgtcacccactcccgtggaagacctcgggccccagaccagcacctcc
cccggacgcctggccttgtctgggaggaagtttgactacagggtgtttgcagccctccct
tcttccagacctgtctatgacatgcagtccccagattttgctgaggagctgaggtccctg
gaaccatctcccagccctggcccacaggaggaggacggagaggtggccatggtgctcctg
ggccggccctcgccaggcgccgggggcgctgaggacgtggctctgtgcagcagtcgccgc
cccatgcggcccgggcgccggggcctgggccctgtgccctcctag
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