Zalophus californianus (California sea lion): 113913098
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Entry
113913098 CDS
T07874
Symbol
CDH20
Name
(RefSeq) cadherin-20 isoform X1
KO
K06807
cadherin 20, type 2
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113913098 (CDH20)
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Major cadherins
113913098 (CDH20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
TAS2R
CcmD
Wzy_C
Motif
Other DBs
NCBI-GeneID:
113913098
NCBI-ProteinID:
XP_027432878
UniProt:
A0A6J2BLL9
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Position
14:79145558..79350172
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AA seq
801 aa
AA seq
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MWTSGRMSNAKSWLGLGMSLYFWGLMDLTTTVLSGTPTPPGKLEALLSDKPQSHSRTKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGVVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLLDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGANPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPIFEPGFYFVEVPEDVAIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVSV
TIKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAVDQDDPHSGQHFYYSLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFHLPILIADSGQPVLSSTGTLTIQVCSCDDF
GHVLSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSLRRHRKQPYIIDDEENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQGGGAPKTRQDMLPEIESLSRYVPQTCAVNS
TVHSYVLAKLYEADTDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGASEGPAPLW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttcgggtagaatgagcaatgcaaagagctggctgggacttggcatgtccttg
tacttctggggactgatggaccttacgaccactgttctctcgggcacaccaacaccacca
ggcaaattagaagcgctcctgtcagacaagccacagtcacactcgcggacaaagaggagc
tgggtttggaaccagttttttgttctggaagagtatactggaactgaccctttgtatgtt
ggcaagcttcattcagacatggacaggggagatggatccatcaaatacatcctctcagga
gaaggtgcaggtgtcgtgtttaccattgacgacaccactggagacatccatgccattcag
aggcttgatcgagaggaaagggcccagtacactttaagggctcaagccctagacaggcgg
accggcagaccaatggagccagagtcagagttcatcatcaaaatccaagacatcaatgac
aatgagcccaagttcctggatggaccttatgtcgccactgtgccagaaatgtcaccagtg
gggacctctgtcatccaagtgacagccacagatgctgatgatccgacctacggcaacagt
gcccgggtagtatacagcattctccagggccagccatatttttctgtggactccaaaaca
ggtgtaattaggacagcgctcatgaacatggaccgagaagccaaagaatactatgaagtg
attatccaagccaaggacatgggagggcagcttggaggattagctgggaccacaacagtc
aacatcaccctcttggatgtcaatgataacccaccccgctttccccagaaacattatcag
atgagtgtgctggaatcggctccagttagctccactgtgggtagagtgtttgccaaggac
ttggatgaaggaatcaatgcagagatgaaatacaccattgtggatggagatggggcagat
gcctttgacattaacacggatcccaatttccaagttggcatcataactgtgaagaagccc
ctgagttttgaaagcaagaaaagttacaccttaaaagtggaaggagccaatcctcaccta
gagatgcgttttctgaacctaggcccatttcaggacacaacaacagtgcacatcagtgtg
gaagatgtggatgagccccccatatttgagccgggcttttattttgtggaggttcctgag
gatgtggcgatcggaacaaccatacagatcatttctgccaaggacccagatgtgaccaac
aattcaatcagatattccattgacagaagcagtgaccctggaagattcttctatgttgac
attacaacaggtgccctaatgactgcaagaccccttgatcgggaggagttttcttggcat
aatatcactgtccttgctatggaaatgaacaatccttcccaggttggaagtgtttccgtc
acaatcaaagtcttagatgtgaatgacaatgctccagaattccccagattctatgaagct
tttgtgtgtgaaaatgccaaagcagggcagctgatccagacagtgagtgcagtggaccaa
gatgacccacacagtggtcagcacttctactacagcttggctccggaggctgctaacaac
cccaacttcaccgttagggacaaccaagataacactgctcggattctcaccaggaggtct
ggcttccggcagcaggagcagagtgtctttcacctgcccatcctgatagcagacagcggg
cagccggtgctgagcagcacgggcacgctgaccatccaggtgtgcagctgcgacgacttc
ggccacgtcctctcctgcagccctgaggcctacatgctccccgtcagtttgagccggggc
gctctcatcgccatcctggcctgcatctttgtcctcttagtgctagtgctgctcattctg
tccctgaggcggcaccggaagcagccgtacatcattgacgacgaggagaacatccatgag
aacatcgtccgctacgatgacgagggcggcggcgaggaggacaccgaggcctttgacatc
gcggccatgtggaacccccgggaggcgcaggggggaggcgcccccaagacgcggcaggac
atgctgcccgagattgagagcctctcccgctacgtgcctcagacgtgcgccgtgaacagc
acggtccacagctacgtgctggccaagctctacgaggccgacacggacctgtgggccccg
cccttcgactccctgcagacgtacatgttcgagggggacggctccgtggccgggtcgctg
agctccctgcagtcggccacgtcggactcggagcaaagcttcgacttcttgacggactgg
gggccccgcttccggaagctggcggagctctacggggcgtcggaggggcccgcgcccctg
tggtga
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