Zalophus californianus (California sea lion): 113913120
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Entry
113913120 CDS
T07874
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zca03009
]
113913120 (DDX54)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113913120 (DDX54)
Ribosome biogenesis [BR:
zca03009
]
Eukaryotic type
Pre-60S particles
Helicases
113913120 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Cob_adeno_trans
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
113913120
NCBI-ProteinID:
XP_027432907
UniProt:
A0A6J2BRV3
LinkDB
All DBs
Position
14:complement(10648321..10667698)
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AA seq
883 aa
AA seq
DB search
MAAGTRPGAGPRSRAAMAQWRKKKGLRKRRGAASQARSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQSGARALVLSPTRELAL
QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDTKAAVLLHLLRTVVRPQDQTVVFVATKHHAEYISELLTT
QGVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDSVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTPARPHEGASGAVSADGVL
GRVPQSVVDDEEGGLQSTLAASLELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDLA
GLGLHPLFSSHFEEKELQRLKLVDSIKNYRSRATIFEINASSRDLSSQVMRAKRQKDRKA
IASFRQGRQGRQGRQERQEDTAGPAPGCSAPQEEKPEEEEEAAGESVEDVFTEVMGRKRP
QPGPDRGAKRRREEAWHRDQEFYIPYRPKDFDSERGLSVGGDGGAFEQQVAGAVLDLMGD
EARNLMRGRQQLKWDRKKKRFVGQSGPEDKKKIKTESGHYVSSSYKRDLYQKWKQKQKID
DRDSEDEGTSHQRGPERRGGKRGRGQGASQPRTPGAPAGRVRSELKTKQQILKQRRRAQK
LRFLQRGGLKQLSARNRRRAQELQRGAFGRGVHAKKGKMRKRM
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcccgggggccggacctcggtcccgcgctgccatggcccagtgg
aggaaaaagaaggggctgcggaagcgccgaggcgcagcctcccaggcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcggaagatgacgcccgggcccagaagctggga
cctggcagacccctgcccaccttccccacctcggagtgcacctcagacgtggagccagac
acgcgggagatggtacgcgcccagaacaagaaaaagaagaagtccggaggcttccagtcc
atgggcttgagctacccggtgttcaagggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccggtgatcctggatggcaaggacgtggtggccatggcc
cggaccggcagcggcaagacggcctgcttcctcatccctatgttcgagcggctcaagacc
cgtagcgcccagagtggggctcgtgcccttgtcctctcgcccacccgcgagctggccctg
cagaccatgaagttcaccaaggagctcggcaagttcacaggcctcaggaccgccctgatc
ctgggtggggacaagatggaagaccagtttgctgccctgcatgaaaatcccgacataatc
attgctacccctgggcgcttggtgcacgtggctgtggagatgaacctgaagttgcagagt
gtggagtacgtggtgttcgatgaggcagacaggctctttgagatgggctttgccgagcag
ctgcaggaaatcatcggccgcctccctgggggccaccagaccgttctgttctctgccacg
ctgcccaaactgctggtggagttcgcccgcgcgggcctcacggagcccgtgctcatccgg
ctcgatgtagacgccaagctcaacgagcagctcaagacctccttcttccttgtgcgcgag
gacaccaaggctgccgtgctgcttcacctgctgcgcaccgtggtgcggccccaggaccaa
acggtggtgtttgtggctacgaagcaccacgccgagtacatcagcgagctgctgacgacg
cagggggtgagctgcgcccacatctacagtgccctggaccagacagcccgcaagatcaac
ctcgccaagttcacccacggcaagtgctccgccctcatcgtgaccgacctggcagcccgc
ggcctagacatcccgctcctcgacagcgtcatcaactacagcttccctgccaagggcaag
ctcttcctgcaccgcgtgggccgtgtggcccgggctggccgaagcggcacagcctactcc
ttagtggccccagacgaggtcccctatctgctggacctgcacctgttcctcggccgcgcc
ctcacccctgcccgcccccatgagggggcctcaggtgcggtcagcgcggacggcgtgctg
ggccgggtgccacagagcgtggtggacgacgaggagggtggcctgcagagcaccctggcg
gcgtcgctggagctgcggggcctgggccgggtggccgacaacgctcagcagcagtacgtg
cgctcccggcctgcaccctcgcccgagtccatcaagagggccaaggagctggacctcgca
gggctgggcctgcaccccctcttcagctcgcacttcgaggagaaggagctgcagcggctg
aagctggtagacagcatcaagaactaccgctcacgggcgaccatctttgagatcaatgcc
tccagccgggacctgagcagccaggtgatgcgcgccaagcggcaaaaggaccgcaaggcc
atcgccagcttccggcaggggcggcaggggcggcaggggcggcaggagcggcaggaggac
acagctggccccgccccaggctgctcagcaccccaggaagagaagcctgaggaggaggag
gaggcagcgggagagagtgtggaggatgtcttcacggaggtcatgggccggaagcggccg
cagccaggacccgaccggggagccaagaggcggagggaggaggcctggcatcgggaccag
gaattctacatcccctaccggcccaaggacttcgacagtgagcggggcctgagcgtcggt
ggggacgggggggcattcgagcagcaggtggctggcgctgtcctggacctgatgggggac
gaagcccggaacctgatgaggggccggcagcagctcaagtgggaccggaagaagaagcgg
tttgtgggacagtcgggaccggaggacaagaaaaagatcaagaccgagagtggccactac
gtcagcagctcctacaaacgggacctctaccagaagtggaaacagaaacagaaaatcgat
gatcgtgactcagaagacgaaggaacatcccaccagcgaggcccagagcgaagaggtggg
aagcggggcagaggccaaggtgcgtcccagccccgcaccccaggcgcccctgcaggccgc
gtgcgctcagagctcaagaccaagcagcagattctgaagcaacggcgccgagcgcagaag
ctgcgcttcctgcagcgagggggcctgaagcagctctccgcccgcaaccggcgccgagcc
caggagctgcagcggggcgccttcggccggggcgtccacgccaagaagggcaagatgagg
aagaggatgtaa
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