Zalophus californianus (California sea lion): 113913140
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Entry
113913140 CDS
T07874
Symbol
TAF4B
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03022
Basal transcription factors
zca05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113913140 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
113913140 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113913140 (TAF4B)
03036 Chromosome and associated proteins [BR:
zca03036
]
113913140 (TAF4B)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113913140 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
113913140 (TAF4B)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113913140 (TAF4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
113913140
NCBI-ProteinID:
XP_027432954
UniProt:
A0A6J2BLU8
LinkDB
All DBs
Position
14:48581238..48705880
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AA seq
864 aa
AA seq
DB search
MPAGLTEPAGAAPPAGVSASGTVTMAPAGTVPVRVESTPVALGAVTKAPVSVCVESTVSQ
PLRSPVGTLVTKVAPVSALPKLSSGPPLPAPQIVAVKAPNTTTIQLPANLQLPPGTVLIK
SNSGQLMLVSPQQAVTRAETSTNITSRPAVPTNTHTVKICTMPNSSSQLIKKVAVAPVKK
LAQIGTTVVTTVPKPSSVQSVAVPPSVVTVTPVKPLNSVTTLKPSSLGASATPSNEPSLN
TENSAAVQTNLSPAMLENVKKCKNFLAMLIKLACSGSQAPEMGQNVKKLVEQLLDGKIEA
EEFTRQLYVELKSSPQPHLVPFLKKSVNALRQLMPNSQSFIQQCVQQTSNEVVIATCTTT
ATTSPVVTTTVCSIQCEKPIIVSGAATPSTMSVPTLNPLAGPGGAKTGVVTLHSVGPCAV
PGGTTAGTVLLQTPKPLVTSIPNTVTAVSLQPEKPVVSGAAVTLALPSVTFGETSAAALC
LPSVKPVVTSAGTTSDKXAVIAPVQIKLAQPGPILSQPAGIPQAVQVKQLVVQQPSGGVA
KQVTTLSHSSALTIQKSGQKKMPVSTAIPTSQFAPASILKQITLPGNKILSIQASPIQKN
KVKENGTTSFRDEDDINDVTSMAGVNLSEENACILATNSELVGTLVQSCKDEPFLFIGAL
QKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSS
DTRSQLKFLEKLDQLEKQRKDLEEREMLLRVAKSRSNKEDPEQLRLKQKAKELQQLELAQ
IQHRDANLTALAAIGPRKKRPLESGSGSEGLKDNLLASGTSGLTATKQLLRPRITRICLR
DLIFCMEQEREMRYSRALYLALLK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctcacggaaccggccggcgccgctccccccgccggtgtgagcgcctcc
gggaccgtgacgatggcccccgctgggactgtgcctgtccgtgtggagagcaccccggtg
gccttgggcgccgtgactaaggctcctgtcagtgtctgcgtggagtccacggtgtcccag
cccctgcggtcccccgtggggaccctggtgaccaaagtggctcctgtcagtgctcttcct
aaactcagcagcggccccccgctgcctgctcctcagatagtcgctgtgaaagcccccaac
accacaacaatccagttgcctgctaatttgcagcttcctccaggaacagttttgatcaaa
agtaacagtggccagttgatgttggtatctcctcagcaagctgtgacgagagcagagacc
tctactaatataacttcaaggccagctgtaccaacgaatactcatacagtcaaaatctgt
acaatgccgaattctagttcacagttaattaagaaagtggcagtagcacctgtcaaaaaa
ttggcacaaataggaactactgttgtaactactgttccgaagccttcctcagtacaatct
gtagctgtgccacccagtgttgtcacagttactcctgtaaagccgttgaattctgtaact
accctgaagccttcaagtttgggagcatcagctactccctcaaatgagcccagtctcaac
acagagaactcagcagctgttcagacgaatctttctccggcgatgctagaaaacgtgaag
aaatgtaagaacttccttgcaatgttaataaaactagcatgtagtgggtcacaggctcca
gaaatggggcagaatgtgaagaaactggtggaacaacttttggatggaaaaattgaagct
gaagaatttactagacaactgtatgttgaactcaagtcttcacctcagcctcacctagtt
ccttttcttaagaaaagtgtgaatgccttacgacaactcatgcccaactcccagagcttt
attcagcagtgtgttcagcagacctctaacgaggtagtcattgctacctgtaccacaaca
gcaacaacttctcctgtggtgacaacaacagtttgctcaatccagtgtgaaaaacccatc
attgtttccggagcagcaacacccagtactatgtcagtgccgactctgaatccgcttgct
ggtccggggggagcaaaaactggagttgtgacacttcattctgtgggtccgtgtgctgta
ccaggaggaacaacagctggaactgttttgcttcagactccaaaaccacttgtgacatct
ataccgaatacagttacagcagtctctcttcaacctgaaaagccagttgtctctggggca
gcagtcacgctggctcttccctcagtaactttcggagaaacttccgcggcagctctctgt
cttccatctgtgaaacccgttgttacttctgctgggaccacatctgacaagnnagccgtc
attgctccagtccagatcaaacttgcacagccgggccccatcctttcacagccagctggg
attcctcaggcagttcaagtcaaacagctagtagtccagcagccttcaggaggtgttgca
aaacaagtgaccacactttcccattcctcagcattgaccattcagaaatctggacagaag
aagatgccagtgagcactgcaatacctaccagtcagtttgctccagcttccattctaaag
caaattaccctgccaggaaataagattctgtcaatccaagcatctcctattcagaaaaat
aaagtaaaagagaatggaacaacatccttcagagatgaagatgacatcaatgatgtgact
tccatggcaggggtcaacctcagtgaagaaaatgcctgcatcttagcaacaaactctgaa
ttggttggcacacttgttcagtcatgtaaagatgaaccatttcttttcattggagctctg
caaaagagaatattagacattggtaaaaagcatgacattacagaacttaactctgatgct
gtgaacttgatctcccatgcaacacaggagcgattacgaggccttctagaaaaactgact
acaattgctcaacatcgaatgacaacttacaaggcaagtgaaaattacatcctgtctagt
gataccagatcacagctcaaatttctcgaaaagctagatcaattggagaagcagagaaag
gatttagaagaaagagaaatgttacttagggtagccaagagtcgttccaataaagaagat
ccagaacagctgagattaaagcagaaagccaaagagttacaacagttggagcttgcgcag
atacaacatagagatgctaacctcacagctcttgcggctattggaccaagaaagaagaga
ccactagaatctgggtctggaagtgagggcttaaaagacaatcttcttgcttctgggaca
tccggtctgacagccaccaaacagttgcttcgtccaagaatcacaagaatctgtctcagg
gacttgatattctgtatggaacaggaaagagagatgaggtattctcgagctctatacctt
gcccttctgaagtga
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