Zalophus californianus (California sea lion): 113913171
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Entry
113913171 CDS
T07874
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113913171 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zca03041
]
113913171 (PRPF38A)
Spliceosome [BR:
zca03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113913171 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
113913171 (PRPF38A)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113913171
NCBI-ProteinID:
XP_027433030
UniProt:
A0A6J2BM05
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Position
4:41900114..41916431
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtgaaggatgcgcacagtatccacggcaccaatcctcagtatctg
gtggagaagatcattcggacgcgaatctatgagtccaagtactggaaagaggagtgcttt
ggactgacggctgaacttgtagtcgataaagccatggagttgaggtttgtgggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcaaatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaaatatgtccgt
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtactta
gagcctctctacaacgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ctgatgcatgtagatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attctaccccggttacagaaacgttatgtgctagaggaagctgagcagctggagcctcgg
gtcagcgctctagaagaggacatggatgatgtggagtccagtgaagaggaggaagaggag
gatgagaagttggagagagtaccctcacctgatcaccgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacattgcgctataggaggagtaggagccggtctcccaga
aggcggagtcggtctcctaaaaggaggagcccctcccctcgccgagaaaggcatcggagc
aaaagcccaagacgtcaccgcagcagatctcgagacagacggcacagatcccgctccaag
tccccaggtcatcaccgtagtcacagacacaggagccactcaaagtctccggaaagatct
aagaaaagccacaagaagagccggagagggaatgagtaa
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